Re: [Bioc-devel] EXTERNAL: Re: Cannot update my development package to Bioconductor

2018-05-15 Thread cstrato
Dear Nitesh, Thank you for pointing me to the website how to resolve the conflict. I hope that now everything is ok. For the records, here is what I did: $ cd /Volumes/T3Data/CRAN/GIT/xps $ git status On branch master Your branch is up-to-date with 'origin/master'. Untracked files: (use "git

Re: [Bioc-devel] EXTERNAL: Re: Cannot update my development package to Bioconductor

2018-05-15 Thread Turaga, Nitesh
Hi You have to fix the merge conflicts. Again, please take a look at the documentation on the website The canonical documentation for git: http://bioconductor.org/developers/how-to/git/ The documentation relevant to your problem: http://bioconductor.org/developers/how-to/git/resolve-conflict

Re: [Bioc-devel] EXTERNAL: Re: Cannot update my development package to Bioconductor

2018-05-15 Thread cstrato
Dear Marcel, Thank you for the clarification, now it seems to work. However, there is a strange problem. Here is what I did: $ cd /Volumes/T3Data/CRAN/GIT/xps $ git remote -v origin g...@github.com:cstrato/xps.git (fetch) origin g...@github.com:cstrato/xps.git (push) upstreamg...@gi

Re: [Bioc-devel] EXTERNAL: Re: Cannot update my development package to Bioconductor

2018-05-15 Thread Turaga, Nitesh
Hi Christian, Marcel is correct. The documentation is given here, http://bioconductor.org/developers/how-to/git/pull-upstream-changes/. Best, Nitesh > On May 14, 2018, at 6:22 PM, Marcel Ramos > wrote: > > Hi Christian, > > It looks like you have to do > > *git pull upstream master * >

Re: [Bioc-devel] EXTERNAL: Re: Cannot update my development package to Bioconductor

2018-05-14 Thread Marcel Ramos
Hi Christian, It looks like you have to do *git pull upstream master * according to your `git remote -v`. Regards, Marcel On 05/14/2018 04:21 PM, cstrato wrote: > Dear Nitesh, > > Thank you for your fast reply. Here isĀ  what I tried now, > including using 'git pull': > > $ cd /Volumes/T3Data