Re: [Bioc-devel] Question about passphrase for SSH key

2020-02-18 Thread Xu Ren
Sorry, please ignore my previous email. I remember my passphrase and pushed the updates successfully. On Tue, Feb 18, 2020 at 12:02 PM Xu Ren wrote: > Hi, > > I'm the package maintainer of Bioconductor package methylGSA > https://bioconductor.org/packages/devel/bioc/html/methy

[Bioc-devel] Question about passphrase for SSH key

2020-02-18 Thread Xu Ren
ing to enter the password stored in the "Keychain Access". Unfortunately, it didn't work. I'm quite sure that I haven't changed my Github account and I was using the same laptop as before. Could someone help me with this? Thanks! Sincerely,

[Bioc-devel] Question about package dependency

2019-02-19 Thread Xu Ren
in R code ... NOTE Namespace in Imports field not imported from: ‘ggplot2’ All declared Imports should be used. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK So I'm wondering if ggplot2 should be imported in this case. Thank you! Sincerely,

[Bioc-devel] Time out in R CMD check

2018-05-27 Thread Xu Ren
IlluminaHumanMethylation450kanno.ilmn12.hg19 package using *getAnnotation *function in minfi package. But this process takes some time, which makes R CMD check exceed 5 min time limit. However, getting the annotation is an essential step and it cannot be avoided. Is this possible for the time limit to be extended? Thanks, Xu Ren