Re: [Bioc-devel] Help updating data in ExperimentHub

2025-06-20 Thread Vinh Tran
g out to h...@bioconductor.org <mailto:h...@bioconductor.org> > > Cheers, > > > > Lori Shepherd - Kern > Bioconductor Core Team > Roswell Park Comprehensive Cancer Center > Department of Biostatistics & Bioinformatics > Elm & Carlton Streets > Bu

[Bioc-devel] Help updating data in ExperimentHub

2025-06-20 Thread Vinh Tran
related packages. I also noticed that the snapshot date is still set to 12 April 2025, while the latest build was on 19 June 2025. Could anyone please help me figure out what might be missing? Many thanks in advance! Best regards, Vinh  Dr. Vinh Tran

Re: [Bioc-devel] Error in SVMDO Package

2024-08-25 Thread Vinh Tran
Thank you for your email! I am on vacation until August 25th, 2024. Your email will be addressed as soon as possible after my return. Best regards, Vinh On 25. Aug 2024, at 21:33, MUSTAFA ERHAN ÖZER via Bioc-devel wrote: > Good day, > > The recent Multiple platform build/check report for B

Re: [Bioc-devel] LazyData in DESCRIPTION file

2020-05-01 Thread Vinh Tran
avoid the warning of BiocCheck(): "Add non-empty \\value to the following man pages:..." Many thanks again for your kind help! Best regards, Vinh ---- Dr. Vinh Tran Dept. for Applied Bioinformatics Inst. for Cell Biology and Neuroscience Goethe

Re: [Bioc-devel] LazyData in DESCRIPTION file

2020-05-01 Thread Vinh Tran
#' An example of a final processed & filtered phylogenetic profile. #' @name finalProcessedProfile #’ … #’ … NULL The command ?finalProcessedProfile still works fine :-) Many thanks for your help! Best, Vinh ---- Dr. Vinh Tran Dept. for Applied Bio

Re: [Bioc-devel] LazyData in DESCRIPTION file

2020-05-01 Thread Vinh Tran
still cannot find any other solutions yet except using "LazyData: true”. Best regards, Vinh Dr. Vinh Tran Dept. for Applied Bioinformatics Inst. for Cell Biology and Neuroscience Goethe University Frankfurt Biologicum, Room 3.209 Phone +49 (0)69/798-42118 &g

Re: [Bioc-devel] LazyData in DESCRIPTION file

2020-04-30 Thread Vinh Tran
Dr. Vinh Tran Dept. for Applied Bioinformatics Inst. for Cell Biology and Neuroscience Goethe University Frankfurt Biologicum, Room 3.209 Phone +49 (0)69/798-42118 > On 30. Apr 2020, at 14:55, Kasper Daniel Hansen > wrote: > > If you don't have lazy data on, you should be

[Bioc-devel] LazyData in DESCRIPTION file

2020-04-29 Thread Vinh Tran
gards, Vinh Dr. Vinh Tran Dept. for Applied Bioinformatics Inst. for Cell Biology and Neuroscience Goethe University Frankfurt Biologicum, Room 3.209 Phone +49 (0)69/798-42118 [[alternative HTML version de

[Bioc-devel] Changes not applied in bioc source

2019-12-05 Thread Vinh Tran
and release branches), which is linked to the bioc git. Could you explain me what is happening? Many thanks! Best regards, Vinh Dr. Vinh Tran Dept. for Applied Bioinformatics Inst. for Cell Biology and Neuroscience Goethe University Frankfurt Biologicum, Room

[Bioc-devel] Warning about the size of git pack file

2019-02-22 Thread Vinh Tran
Dear all, I am planning to submit a package into Bioconductor. But BiocCheck() gave a warning about the size of the git pack file: $warning [1] "The following files are over 5MB in size: '.git/objects/pack/pack-29a3f2d2d1ed7d701d59dd2ce921229f2b9dab68.pack'" I tried to use git filter-branch to