Re: [Bioc-devel] Merging GInteraction/GenomicInteractions ranges

2019-02-19 Thread Liz Ing-Simmons
Hi Luke, If I understand correctly what you want to do, you can use `findOverlaps()` to create a new GInteractions object from a set of expanded ranges and the original interactions. anchor.one <- GRanges(c("chr1", "chr1", "chr1", "chr1"), IRanges(c(10, 20, 30, 20), width=5))

Re: [Bioc-devel] Changing package maintainer: git credentials

2018-02-26 Thread Liz Ing-Simmons
> Please try again. > > Valerie > > > > > > On 02/25/2018 08:47 AM, Liz Ing-Simmons wrote: > > Hi there, > > I don't appear to have write access to the GenomicInteractions package, so > I'm wondering if this went through properly or if there's something

Re: [Bioc-devel] Changing package maintainer: git credentials

2018-02-25 Thread Liz Ing-Simmons
kage. > > Thanks, > > Nathan > > On 16 January 2018 at 17:54, Liz Ing-Simmons > wrote: > >> Hi Nitesh, >> >> That's correct, Nathan is no longer a maintainer for the package, and >> I've cc'd him here. I don't think he's

[Bioc-devel] Changing package maintainer: git credentials

2018-01-13 Thread Liz Ing-Simmons
Hi there, I am a maintainer for the GenomicInteractions package, and I'd like to set up git access so that I can update the package. However I never had my own svn credentials, so I'm not sure what to put into the Google form. I couldn't figure out who to contact about this so I thought I'd ask he