[Bioc-devel] Bioconductor Git Credentials

2019-05-06 Thread Josef Spidlen
ith a maintainer of a Bioconductor package. But I thought it would be considering that this Maintainer: Josef Spidlen is in the DESCRIPTION of flowUtils. Can someone help? Thanks, Josef [[alternative HTML version deleted]] ___ Bioc-de

[Bioc-devel] Looking for a maintainer for the flowQB R/BioConductor package

2019-04-08 Thread Josef Spidlen
-- Josef Spidlen, Ph.D. Senior Director, R&D Informatics, BD Life Sciences Tel. +1.541.201.0022 385 Williamson Way, Ashland, OR 97520, USA BD and FlowJo are one! Supporting you and your research from design to discovery. bd.com | flowjo.com [[alternative HTML version del

[Bioc-devel] Should flowCore be importing checkAtAssignment from methods?

2015-05-11 Thread Josef Spidlen
may be using checkAtAssignment without declaring so in the NAMESPACE, and this issue is normally not noticeable since "methods" are typically loaded automatically, but not when using Rscript. Cheers, Josef -- Josef Spidlen, Ph.D. Staff Scientist, Terry Fox Laboratory, B

[Bioc-devel] Announcing a new package: FlowRepositoryR

2015-04-09 Thread Josef Spidlen
supported. All access is read-only at this point, but we will look into adding write functionality after the current BioConductor release. Please let me know if you have any feedback, suggestions or feature requests. Cheers, Josef -- Josef Spidlen, Ph.D. Staff Scientist, Terry Fox Laboratory, BC

Re: [Bioc-devel] read fcs file from CyTOF with

2014-09-16 Thread Josef Spidlen
version of the standard). Cheers, Josef -- Josef Spidlen, Ph.D. Staff Scientist, Terry Fox Laboratory, BC Cancer Agency 675 West 10th Avenue, Vancouver, BC, V5Z1L3, Canada Tel. +1 604-675-8000, ex. 7755 Date: Fri, 12 Sep 2014 14:52:25 -0700 > From: Mike > To: , > Subject: Re: [Bioc-de

[Bioc-devel] biocLite message "R package not available" is confusing

2014-08-19 Thread Josef Spidlen
e ~6,000 CRAN packages?), then it could also produce errors like "R package ... seems like a CRAN package; you may want to try install.packages to install it"). That may help some users as well. That's just my 2c :-). Cheers, Josef -- Josef Spidlen, Ph.D. Staff Scientist, Terry Fox

Re: [Bioc-devel] Dependency on windowing systems in the flowCore package

2014-04-23 Thread Josef Spidlen
ore should not depend on ks > anymore. > Mike > On 04/22/2014 12:14 PM, Kieran O'Neill wrote: > > Thanks all for this work. It definitely makes the most sense to factor > > out this functionality. > > > > One thing, though: Josef Spidlen pointed out to me the ot