Re: [Bioc-devel] BiocFileCache Caching ERROR on devel builders

2021-07-30 Thread Gavin Lloyd
This might be the structToolbox package. I have reverted the part of the commit where I made changes to the cache location and pushed to devel (I didnt make changes to cache location on release branch). Hopefully that is enough to correct it. Apologies to everyone for any issues I may have inad

Re: [Bioc-devel] ExperimentHub package development - Windows OS specific error

2021-03-03 Thread Gavin Lloyd
pshot date...?). You could ask your reviewer for advice in this regard, or maybe someone on the mailing list will comment. Gavin From: Murphy, Alan E Sent: 02 March 2021 20:07 To: Gavin Lloyd (College of Medical and Dental Sciences); bioc-devel@r-project.o

Re: [Bioc-devel] ExperimentHub package development - Windows OS specific error

2021-03-02 Thread Gavin Lloyd
Your file seems to be encoded as UTF-8-BOM. When I read it in on my Windows 10 machine the Title column has extra characters at the front ("�..Title"), which is why your function returns "no object found" when checking for the Title column. If I resave your file with UTF-8 format your functio

Re: [Bioc-devel] Cannot reproduce a regionReport 1.21.7 error on the Bioc 3.11 Linux builder

2020-04-24 Thread Gavin Lloyd
I also had an issue related to cropping using BiocStyle pdf_document, and used the same fix. https://github.com/Bioconductor/BiocStyle/issues/75 Gavin From: Bioc-devel on behalf of mtmorgan.b...@gmail.com Sent: 24 April 2020 11:26:30 To: Leonardo Collado Torres;