Re: [Bioc-devel] Missing CHM13v2.0 TxDB and OrgDb objects

2023-12-12 Thread Christian Arnold via Bioc-devel
gd5OOsvXj8vYfmUZphWadsaXZmdIMiLYcLZEGkJmZhkFTxT-wXY5c_hr0C9adM7PNUeks$ > and adjust the code noted above for the TxDb. > > For the org.db I have to get back to you. > > On Sun, Dec 10, 2023 at 12:06 PM Christian Arnold via Bioc-devel < > bioc-devel@r-project.org&g

[Bioc-devel] Missing CHM13v2.0 TxDB and OrgDb objects

2023-12-10 Thread Christian Arnold via Bioc-devel
Hello, I am working with the new human T2T-CHM13v2.0  assembly and while a BSgenome package already exists (BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0), I could not find the corresponding TxDb and OrgDb packages. Is there any information when they may also become available so it is easier to work with t