[Bioc-devel] failed to open BamFile: failed to open SAM/BAM file file: 'F:\biocbuild\ExperimentHub_cache/

2022-10-27 Thread CHEN Ying
Dear Bioconductor team, Relating to the ExperimentHub error message that was posted earlier, we are seeing the same build error for our package bambu as well, and it was there for quite some time already. Could you also help to look into that for our package as well? Thank you very much Regar

[Bioc-devel] Landing page build status different from the build report

2021-11-24 Thread CHEN Ying
Hi, I have recently pushed a change to fix the build error reported previously due to dependency packages' updates for bambu. Now the build report is all ok, but the landing page still shows error. Any suggestions to fix this? Thank you, Regards, Ying This e-mail and any attachments are only fo

[Bioc-devel] Updating experiment hub data for NanoporeRNASeq

2021-10-14 Thread CHEN Ying
Dear Bioconductor team, I have recently pushed changes to update the metadata information for NanoporeRNASeq. Could you provide guidance on the next steps to update the data in the experiment hub? Thanks Regards, CHEN Ying This e-mail and any attachments are only for the use of the intended

[Bioc-devel] Query on updating version for bioconda-bambu

2020-11-25 Thread CHEN Ying
Hello BioC community, I have recently updated the version of bambu with some small bug fixes. I noted that however, the available bionconda-bambu version is still 1.0.0. Could you advise on how to update bionconda-bambu to the most recent version? Thank you Regards, CHEN Ying This e-mail and

Re: [Bioc-devel] NanoporeRNASeq not found in the devel Bioc3.12 package list

2020-10-26 Thread CHEN Ying
ure what I am supposed to do. Please advise on the matter. Thank you Regards, CHEN Ying From: Martin Morgan Sent: Saturday, 24 October 2020 10:13 PM To: CHEN Ying ; bioc-devel@r-project.org Subject: Re: [Bioc-devel] NanoporeRNASeq not found in the devel Bioc3.1

[Bioc-devel] NanoporeRNASeq not found in the devel Bioc3.12 package list

2020-10-23 Thread CHEN Ying
built successfully. I was wondering will NanoporeRNASeq still be included in the Bioc3.12 version? If so, when will the status be reflected on Bioc3.12 package list? Thank you Regards CHEN Ying This e-mail and any attachments are only for the use of the intended recipient and may contain material