eam/
Best regards,
Alejandro Reyes
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atrix_1.2-11 gridExtra_2.3
GenomeInfoDbData_0.99.1
[17] purrr_0.2.4 ggplot2_2.2.1 bitops_1.0-6
RCurl_1.95-4.8
[21] glue_1.2.0 stringi_1.1.5 compiler_3.4.2
scales_0.5.0
Best regards,
—
Alejandro Reyes,
xtable_1.7-4
[28] scales_0.2.5 Hmisc_3.16-0 annotate_1.47.4
[31] gridExtra_2.0.0 ggplot2_1.0.1digest_0.6.8
[34] stringi_0.5-5grid_3.3.0 tools_3.3.0
[37] bitops_1.0-6 magrittr_1.5 RCurl_1.95-4.7
[40] RSQLite_1.0.0Formula_1.2-1
our end. This seems
somewhat undesirable from a reproducibility perspective - I cannot even
install the packages!
Best,
Kasper
On Tue, Apr 22, 2014 at 2:19 PM, Alejandro Reyes wrote:
Dear Dan, Dear developers list,
Due a recent change in one cran package, DEXSeq 1.8.0 (for the R vers
Dear Dan, Dear developers list,
Due a recent change in one cran package, DEXSeq 1.8.0 (for the R version
3.0.*) stop working. I fixed this conflict in the release branch of
bioconductor and tried to commit my changes. But I don't seem to have
write access, e.g:
$ svn ci --username a.reyes -m
Dear all,
No problem from my side, I can adapt DEXSeq to those changes.
Best regards,
Alejandro Reyes
Mike, Alejandro,
I also wonder about getting rid of the 'exonID' metadata column. This
is redundant with 'exonic_part_number'. Do you have a preference for
keep
