Just reporting a possible issue with the display of author ORCID IDs on
Bioconductor package landing pages.
On the release (Bioconductor 3.20) package landing pages, ORCID IDs are not
displayed, even if they are included in the package DESCRIPTION Author@R, for
example:
https://bioconductor.
Hi,
Timeouts appear with BioC 3.20. They are no more present in 3.21. So, I
don't think I need to change code. Do you agree?
Best,
Samuel
BTW, the link /help/mailing-list/ should be replaced in the mail to
/help/support/
Le 2025-02-24 à 18:15, bbs-nore...@bioconductor.org a écrit :
[This
Hi, on Feb 12 I brought up this problem in the #support-site channel of
the Bioconductor Slack workspace (it's currently the last message on
that channel), and it was there where Lori said:
"We made some adjustments to try and fix the exposed emails in digest
and appears to have broken sending
The Bioconductor Team is continuing to identify packages that will be
deprecated in the next release to allow for the Bioconductor community to
respond accordingly. This is the current list of deprecated packages for Bioc
3.21.
It should be noted, we did try to reach out to these package mainta
biocbuild@kunpeng2 ~/g/CARDspa (devel)> R CMD build .
* checking for file ‘./DESCRIPTION’ ... OK
* preparing ‘CARDspa’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings
I found a workaround!
1) I copied pcs.csv from gdal-2.4.4 (
https://anaconda.org/conda-forge/gdal/files?page=464)
2) https://github.com/conda-forge/pyproj-feedstock/issues/130 explained the
problem with PROJ - I had to manually export
PROJ_LIB=/home/biocbuild/bioconductor/gdal/.pixi/envs/default/s
Using libgdal-core 3.x fails with:
> BiocManager::install(c("sf"))
Bioconductor version 3.21 (BiocManager 1.30.25), R Under development
(unstable)
(2025-02-19 r87757)
Installing package(s) 'sf'
trying URL 'https://cloud.r-project.org/src/contrib/sf_1.0-20.tar.gz'
Content type 'application/x-gzip
