Re: [Bioc-devel] New version of rmspc - error

Hi, I've installed .NET 9 at kunpeng2 and taishan machines. The next builds should be fine/better ! Regards, Martin On Mon, Mar 17, 2025 at 4:45 AM Meriem Bahda wrote: > Hi Lori, > > I see that the error in all servers is *System command 'dotnet' failed, > *which > means this is an issue relat

Re: [Bioc-devel] Important Bioconductor Release Deadlines

My apologies for any confusion 2 weeks until the 3.20 Freeze. The current release 3.20 freeze is NOT next Monday March 24 it is Monday March 31st. Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm

[Bioc-devel] EBSeq Installation Error – C++ Version Update

Dear Bioconductor Team, I have been receiving error emails indicating that *EBSeq* encounters issues during installation. Upon investigating, it seems to be due to the C++ version requirement, which should be *C++14* instead. To address this, I have updated the relevant files to explicitly requir

Re: [Bioc-devel] failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz

We're now to version 2.51.5 and that works on everything but nebbiolo1. On this platform it compiles but fails to build the vignettes with a buffer overflow. This may be related to moving to snprintf from sprintf because, well, the difference between those two functions has to do with preventing bu

[Bioc-devel] Important Bioconductor Release Deadlines

Please remember, The Bioconductor 3.20 branch will be frozen Monday March 24th. After that date, no changes will be permitted ever on that branch. The deadline for devel Bioconductor 3.21 packages to pass R CMD build and R CMD check is Friday April 11th. While you will still be able to make co

Re: [Bioc-devel] Adding new maintainer to package TFEA.ChIP

Excellent. we will adjust the configuration on our end and reach out off list to Yosra with instructions. Cheers, Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 1426

Re: [Bioc-devel] Bioconductor archive?

It looks like the Date/Publication field is only present when there was a change on the branch post release. (ie. any package that has a version x.y.(z+n) instead of x.y.0. After a release is frozen and a new release occurs, Bioconductor does not allow any changes or fixes even to bugs. A rel

Re: [Bioc-devel] Adding new maintainer to package TFEA.ChIP

Hello again, The info about the new maintainer is: Name: Yosra Berrouayel Email: yberroua...@iib.uam.es GitHub ID: yberda Thank you, Laura Puente [https://upload.wikimedia.org/wikipedia/commons/thumb/0/06/ORCID_iD.svg/2048px-ORCID_iD.svg.png] [https://