Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-14 Thread Marcel Ramos
Hi, On 3/14/25 5:42 AM, Lluís Revilla wrote: > Hi! > > Before moving to git (and shortly after), Bioconductor used to support > these kind of files. Can you point to where in the documentation these files were supported? > One can still find repositories with these files on code.bioconductor.org

Re: [Bioc-devel] Adding new maintainer to package TFEA.ChIP

2025-03-14 Thread Kern, Lori via Bioc-devel
Thank you for reaching out. As the current maintainer of the package we can proceed with this request. We would need the name, email and github id (if available) for the new maintainer to create the BiocCredentials account needed for Bioconductor maintenance. After which we can change the co

[Bioc-devel] Adding new maintainer to package TFEA.ChIP

2025-03-14 Thread Laura Puente Santamaría
To whom it may concern, I'd like to appoint a colleague as the new maintainer of the package TFEA.ChIP, what steps shoul I follow? Kind regards, Laura Puente [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list http

Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-14 Thread Lluís Revilla
Hi! Before moving to git (and shortly after), Bioconductor used to support these kind of files. One can still find repositories with these files on code.bioconductor.org. As these files are optional and might not even be described by guidelines they do not bother new developers (or Bioconductor c

Re: [Bioc-devel] failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz

2025-03-14 Thread Robert Castelo via Bioc-devel
Thanks Kasper, let me know if there is anything I could help with. cheers, robert. On 13/3/25 22:54, Kasper Daniel Hansen wrote: > I am actively working on Rgraphviz right now following some reports by > CRAN about >   - issues with the package failing on the C23 standard >   - issues with the