[Bioc-devel] Microshades: Appropriate for BioConductor

2025-03-13 Thread Scott McLoud via Bioc-devel
Hello, I'm a graduate student working on preparing the R package "microshades" for submission to BioConductor. My question is, does this fulfill BioConductor's requirements of addressing areas of high-throughput genomic analysis? The GitHub page for the R package can be found here: https://gi

Re: [Bioc-devel] failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz

2025-03-13 Thread Kasper Daniel Hansen
I am actively working on Rgraphviz right now following some reports by CRAN about - issues with the package failing on the C23 standard - issues with the package failing on Windows using the new R toolset for the next R release - a switch from sprintf to snprintf Tomas and Brian have been sup

Re: [Bioc-devel] failing with non-reproducible error "no slot of name "name" for this object of class "pEdge"" from Rgraphviz

2025-03-13 Thread Robert Castelo via Bioc-devel
Hi, I'm experiencing a similar issue with qpgraph, which is failing on 'nebbiolo1' (ubuntu 24.02) only: https://bioconductor.org/checkResults/3.21/bioc-LATEST/qpgraph/nebbiolo1-buildsrc.html giving the following error when building one of the vignettes: --- re-building ‘qpgraphSimulate.Rnw’ us

Re: [Bioc-devel] New version of rmspc - error

2025-03-13 Thread Kern, Lori via Bioc-devel
After a package is submitted to Bioconductor it runs on the daily build and not on demand builds that occurred during the submission process. I'm not sure which build report you are looking but the devel is still ERRORing across all platforms with the latest version that is pushed to git.biocond