Re: [Bioc-devel] C++ compiler error on kunpeng2 ?

2025-03-11 Thread Martin Grigorov
Hi, Installed the tbb-devel package! The next build should be fine! Thanks for the report! Regards, Martin On Mon, Mar 10, 2025 at 1:39 PM Martin Grigorov wrote: > Hi, > > I’ll check which package needs to be installed to provide libtbbmalloc! > > On Mon, 10 Mar 2025 at 13:19, Katja Danielzik

Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-11 Thread Martha M
Hi Leonardo, BioC doesn't oppose an Rmd -- you just need to include the eval=F in the package installation code chunk. If helpful, please have a look at our package GitHub: https://bioconductor.org/packages/release/bioc/html/rhinotypeR.html Best, Martha On Tue, 11 Mar 2025 at 14:05, Leonardo Co

Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-11 Thread Marcel Ramos Pérez
Hi Leo! As Martha responded, there is no issue with having a README.Rmd in the package folder. (The section is not so clear and could use some revision) Note that some authors maintain a README.md file without an Rmd. For some of my packages, I re-use the vignette to generate the README.md file.

[Bioc-devel] Bioconductor 3.21 db0s, OrgDbs, and TxDbs now available

2025-03-11 Thread Kern, Lori via Bioc-devel
Hello Bioconductor community, The newest db0, OrgDb, and TxDb annotation packages for the upcoming Bioconductor 3.21 release are up and available for download in the devel version of Bioconductor. The deadline for submitting contributed annotation packages will be Wednesday April 9th The new

[Bioc-devel] Important Bioconductor Release Deadlines

2025-03-11 Thread Kern, Lori via Bioc-devel
Packages submitted to the new package submission queue at this time are a first come first serve basis. Reviewers are volunteer and review packages as time permits. Submitting now will not guarantee inclusion into 3.21. It must pass the submission process including an official review and be ac