Hi,
I am planning to deprecate the benchmarkfdrData2019
(https://bioconductor.org/packages/benchmarkfdrData2019) ExperimentHub
Bioconductor package. The reason is because this package relies heavily on
SummarizedBenchmark, which is now deprecated as well
(https://bioconductor.org/packages/Sum
cargo is installed on the Linux devel builder, but in a different location
biocbuild@nebbiolo1:~$ which cargo
/usr/bin/cargo
biocbuild@nebbiolo1:~$ cargo --version
cargo 1.75.0
We generally prefer to apt install dependencies on the Linux builders, which
might be why the path is different. It is
Hello,
I have problem with GDCquery_clinic available at
https://bioconductor.org/packages/release/bioc/vignettes/TCGAbiolinks/inst/doc/clinical.R
.
When I tried used command: q1 <- GDCquery_clinic(project = "TCGA-OV",
type = "clinical") I got error:
Error in set(x, j = name, value = value)
