Re: [Bioc-devel] Review status of CARDspa package

2024-10-01 Thread Kern, Lori via Bioc-devel
I'll ping your reviewer to check status and reassign if necessary. Sorry for the delay Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ___

[Bioc-devel] Review status of CARDspa package

2024-10-01 Thread Jing Fu
Hi All, My package CARDspa was assigned a reviewer two months ago, but I haven't seen any updates since. If I need to do anything from my side? Best, Jing [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://

Re: [Bioc-devel] Add additional maintainer to R package

2024-10-01 Thread Kern, Lori via Bioc-devel
By R standards, you'll only be able to list one maintainer in the package DESCRIPTION; but if they are not already added as a contributor that would be good to add. We can grant extra push access to the package but that needs to be done on our side. We will need to create a BiocCredentials acco

Re: [Bioc-devel] New Contribution Trouble with Git/GitHub

2024-10-01 Thread Sagendorf, Tyler J via Bioc-devel
That worked. Thank you, Lori. Tyler From: Kern, Lori Sent: Tuesday, October 1, 2024 6:03 AM To: bioc-devel@r-project.org; Sagendorf, Tyler J Subject: Re: New Contribution Trouble with Git/GitHub Check twice before you click! This email originated from outside PNNL. I think you could do the re

Re: [Bioc-devel] New Contribution Trouble with Git/GitHub

2024-10-01 Thread Kern, Lori via Bioc-devel
I think you could do the reverse of step 5 and do something like git push origin devel:master which basically says push to the origin remote and map the current devel branch to the master branch there. Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Depa

Re: [Bioc-devel] ChemmineOB build failures

2024-10-01 Thread Jennifer Wokaty
Hi Kevin, I've reinstalled OpenBabel on the Windows release builder, palomino7. However, I need additional guidance to set up on Mac ARM64 as it must be compiled. On the Intel macs, we brew install OpenBabel, so I tried the same with the Mac ARM64 machines; however, running R CMD build with the

Re: [Bioc-devel] ChemmineOB build failures

2024-10-01 Thread Kevin Horan
Jennifer, Great, thanks. Regarding mac arm64, I'm not familiar with that platform, and I don't have access to it to test on. However, there is an open issue on github with several folks working with OpenBabel on arm64, they might be able to help. Perhaps you could post your question here: ht