Re: [Bioc-devel] cfTools build error

2023-10-13 Thread Jennifer Wokaty
Ran, I don't see the error that you mention. The current error on the build report is that cfTools is missing cfToolsData, which I understand is a recently accepted experiment package. It should probably become available on Tuesday so I may see the error on the build report on Wednesday. When I

Re: [Bioc-devel] AnnotationHub Integration

2023-10-13 Thread Kern, Lori via Bioc-devel
Yes it seems appropriate. Depending on the type of data maybe ExperimentHub would be preferred over AnnotationHub. It depends on what information you are providing. We do have multiple types of data provided in the hubs. Many data are in database type objects like sqlite and such. This is ab

Re: [Bioc-devel] arm64 on Mac build fails due to problem with MPO.db

2023-10-13 Thread Matteo Tiberti via Bioc-devel
@Jennifer Wokaty great, thank you, happy the issue is on its way to be resolved. Looking forward to see them implemented on Thursday @Robert Castelo @Zuguang Gu thank you for your insights! These wil