thanks to all for the explanations and feedback.
I'll reach out to the respective developers of these packages - hoping they
respond and fix the issue timely.
cheers, jo
---
Johannes Rainer, PhD
Eurac Research
Institute for Biomedicine
Via A.-Volta 21, I-39100 Bolzano, Italy
email: johannes.r
Thank you all for the help. I corrected the DESCRIPTION file and bump the
version.
Thank you,
Matineh Rahmatbakhsh
On Tue, Apr 4, 2023 at 1:50 PM Ramos Perez, Marcel <
marcel.ramospe...@roswellpark.org> wrote:
> Thank you Martin for providing the link.
>
> I misread the changes on the release br
Thank you Martin for providing the link.
I misread the changes on the release branch.
It looks like the DESCRIPTION file should be modified by removing the merge
commit tag and
following the bug fix instructions here:
https://contributions.bioconductor.org/git-version-control.html?q=bug#bug-fix-
The release version DESCRIPTION file is malformed, because it contains a
(partial) merge commit tag
https://code.bioconductor.org/browse/HPiP/blob/RELEASE_3_16/DESCRIPTION#L69
Martin
From: Bioc-devel on behalf of matine rb
Date: Tuesday, April 4, 2023 at 3:00 PM
To: bioc-devel@r-project.org
Hi Matineh,
It looks like there was some extra text in the DESCRIPTION at commit 83ab252 :
>>> 509b8e4 (version bump)
The next build of the release branch will happen tomorrow. It should be cleared
up by then based on the changes you've made.
Best regards,
Marcel
On 4/4/23 2:59 PM, matin
Dear Bioc team
I am the maintainer of the HPiP package which is currently showing unknown
on the build report on the landing page.
I would appreciate it if you could please help with this matter.
Thank you,
Matineh Rahmatbakhsh
[[alternative HTML version deleted]]
_
Dear BioC team,
I am having the same error as many others (the missing BiocStyle
issue) and I wanted to fix it. But I somehow am not getting into
git.bioconductor.org anymore :
$ git fetch --all
Fetching origin
Fetching upstream
ssh: connect to host git.bioconductor.org port 22: Connection
On Tue, Apr 4, 2023 at 2:44 AM Oleksii Nikolaienko
wrote:
>
> Hi,
> maybe because BiocStyle is not listed as a dependency or suggested package
> in DESCRIPTION?
> More info here: https://github.com/Bioconductor/BBS/issues/248
Yes, this is why. The package needs 'BiocStyle' to build the vignette,
The Code Freeze for the current Bioconductor 3.16 Release is next Monday April
10, 2023. After this date there will be no changes to the code on this branch;
this includes bug fixes or hot fixes. If your package is failing on the
release build report, this weekend will be your last chance eve
Hi,
maybe because BiocStyle is not listed as a dependency or suggested package
in DESCRIPTION?
More info here: https://github.com/Bioconductor/BBS/issues/248
Best,
Oleksii
On Tue, 4 Apr 2023 at 11:22, Rainer Johannes
wrote:
> Dear all,
>
> I'm continuing to see some strange dependency problems
Dear all,
I'm continuing to see some strange dependency problems for packages on the
linux build system for Bioconductor 3.17. First time I've seen them where on
the build report for snapshot 2023-03-31, and they are still there for snapshot
date 2023-04-02 (build report from 2023-04-03). What
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