Hi,
I also can't get my github actions bioc-check workflow running for devel,
so I checked the bioc-devel docker image & can't seem to install BiocCheck
on that container. Is this likely to be available for devel soon? Error
from my local installation of the container below:
BiocManager::install
The release of ggplot2 3.4.0 has broken the ngsReports nightly build in
RELEASE_3_16. I've been through the package and corrected everything to
resolve the errors, but cannot get github actions to install ggplot2 3.4.0.
Personally, I like to pass a github actions test before pushing to the
current
This issue should now be resolved. We apologize for the inconvenience.
Specifically for SpliceWiz: It seems like the version bump to 1.1.2 did
propagate to git.bioconductor.org despite receiving that ERROR, and therefore
we cannot revert as the builders are already in process and we can only
Hi,
I keep getting to receive an error in my package during check process, I tried
to reproduce the error in my environment, but I cannot understand what it is
going wrong, because
devtools::check() and BiocCheck do not return any error, I guess that
something's wrong in a file stored as exampl
Thanks Mike and Lori,
I am pushing to g...@git.bioconductor.org:packages/SpliceWiz.git
Please let me know when you have identified the problem. Once it is ready,
could you remove the two latest commits so I can bump from 1.1.0 to 1.1.1?
Thanks in advance,
Alex
On Tue, 8 Nov 2022 at 23:24, Ker
Thank you for reporting. We have had multiple reports of this issue and are
investigating.
Lori Shepherd - Kern
Bioconductor Core Team
Roswell Park Comprehensive Cancer Center
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
__
Hi Alex,
Where are you pushing this too? Maybe the output from git remote -v will
be helpful.
The reason I'm asking is that it looks like SpliceWiz has already been
accepted to Bioconductor, so I wouldn't expect to see messages like "post
on the Github issue where your package is being reviewed"
