Looks like there's a nasty clash between dbplyr (CRAN) and the devel
version of clusterProfiler:
> library(clusterProfiler)
> library(dbplyr)
Error in completeSubclasses(classDef2, class1, obj, where) :
trying to get slot "subclasses" from an object of a basic class
("NULL") with no slots
Er
Hi Junpeng,
FWIW the EpiCompare package seems to be failing in exactly the same way:
https://bioconductor.org/checkResults/3.16/bioc-LATEST/EpiCompare/nebbiolo2-install.html
Also I can easily reproduce this on my laptop (Ubuntu 22.04):
> BiocManager::install("miRspongeR")
Bioconductor version
Dear Bioconductor Team,
I'm maintaining the scp package.
After running the BiocCheck, I needed to clean my git repository. I
followed the instruction here:
https://contributions.bioconductor.org/git-version-control.html#remove-large-data-files-and-clean-git-tree
As the last step, I would lik
Hi Bioconductor community,
When I build/check the miRspongeR R package (development version), there is
an error as follows. The release version of the miRspongeR R package is OK.
*Error: .onLoad failed in loadNamespace() for 'dbplyr', details:
call: setClass(cl, contains = c(prevClass, "VIRTUAL
Hi Bioconductor community,
When I build/check the miRspongeR R package (development version), there is
an error as follows. The lelease version of the miRspongeR R package is OK.
*Error: .onLoad failed in loadNamespace() for 'dbplyr', details:
call: setClass(cl, contains = c(prevClass, "VIRTUAL
