Re: [Bioc-devel] Change bioconductor maintainer

2021-11-30 Thread CoreTeam Bioconductor
In order for the maintainer email to change on the package landing pages, you will need to update in the DESCRIPTION of your package on git.bioconductor.org. The GitCredentials app that manages package access ssh keys is already using zl...@mdanderson.org. Please see git help pages for pushing ch

Re: [Bioc-devel] version bump

2021-11-30 Thread Hervé Pagès
Hi, We've set HPiP's version to 1.1.1 in devel (master branch, BioC 3.15). The version that is currently published in BioC 3.15 is 1.1.0. See: https://bioconductor.org/packages/3.15/HPiP Make sure to re-sync your GitHub repo with your package at git.bioconductor.org before doing any furthe

[Bioc-devel] version bump

2021-11-30 Thread matine rb
Dear Bioconductor community members, I have pushed some changes to the HPiP package, but I mistakenly changed the version bump from 0.99.19 to 1.99.1, and therefore I am getting the following error: (Illegal version bump from '1.99.1' to '0.99.19') May you please help me with this issue? I reall

Re: [Bioc-devel] Use set.seed inside function

2021-11-30 Thread Kasper Daniel Hansen
Martin's suggestion is the way to go. For display purposes, you basically never want random colors, you almost always want to select distinct colors and there are principled ways of doing that. Best, Kasper On Tue, Nov 30, 2021 at 6:59 AM Martin Morgan wrote: > Check out grDevices::hcl.pals (al

Re: [Bioc-devel] Use set.seed inside function

2021-11-30 Thread Martin Morgan
Check out grDevices::hcl.pals (also https://www.zeileis.org/papers/Zeileis+Hornik+Murrell-2009.pdf) or the RColorBrewer package (also https://colorbrewer2.org) for principled selection of colors. Sounds like you're interested in 'qualitative' color palletes. Martin Morgan On 11/29/21, 4:23 PM