Re: [Bioc-devel] Don't have git access to my newly submitted git package

Hi Nitesh, Thanks for working on this ... I've been able to push some changes I've made up to the upstream/master, so I think we should be ok for now. Waiting till the next cycle is fine if you think that is the best approach. > In all honesty, I'd prefer to attach the associated "shiny add-on p

Re: [Bioc-devel] Error when building a package

Let's keep this conversation on the bioc-devel list where it started. On 04/10/2021 20:28, matine rb wrote: Hi Hervé, yes, I am using R CMD build *--keep-empty-dirs -- no-resave-data* and getting no error. I still don't know what is causing the problem. Again, make sure to read what's in the

[Bioc-devel] regain access to git repository

Hello, I am the author of two Bioconductor packages that I haven�t touched for a long time - since before the migration to git, and I believe before the existence of the BiocCredentials App. I have long since lost any credentials. Apologies if thi

Re: [Bioc-devel] Don't have git access to my newly submitted git package

Hi Steve, This is resolved now. You should see access to your package. Waiting till the next cycle is fine if you think that is the best approach. Best, Nitesh Nitesh Turaga Scientist II, Department of Data Science, Bioconductor Core Team Member Dana Farber Cancer Institute > On Oct 1, 2021,

Re: [Bioc-devel] access problems

Hi Leo, The best way forward is just to add a new SSH key to your BiocCredentials account. The email registered is lsc...@essex.ac.uk. I see that you tried the password reset option. To help the issue, please try to “activate” your account https://git.bioconductor.org/BiocCredentials/account_

Re: [Bioc-devel] Add maintainer to scruff and celda

Hi, Joshua campbell is the maintainer of these two packages already. If that is not reflected in the description file of the package, it is up to Joshua to change it. Best, Nitesh Nitesh Turaga Scientist II, Department of Data Science, Bioconductor Core Team Member Dana Farber Cancer Institut

Re: [Bioc-devel] Error when building a package

Hi, Are you using the same settings as the build machines as explained in the rectangular box on the following page? http://bioconductor.org/checkResults/devel/bioc-LATEST/HPiP/ Best, H. On 04/10/2021 13:50, matine rb wrote: Dear Bioconductor community members, I have submitted the pack

[Bioc-devel] Deprecation of dualKS and Slinky packages

Colleagues, As I am now focused entirely on clinical and administrative duties at my institution, I would like to deprecate the following packages: dualKS slinky Please advise on next steps. Thank you! -Eric [[alternative HTML version deleted]] _

[Bioc-devel] Error when building a package

Dear Bioconductor community members, I have submitted the package 'HPiP' and the package has been accepted (link : http://bioconductor.org/packages/3.14/bioc/html/HPiP.html). However, the package has the following problem : package or namespace load failed for 'kableExtra': .onLoad failed in loa

[Bioc-devel] Add maintainer to scruff and celda

Hi, I sent this to maintai...@bioconductor.org but no one replied. I am the current maintainer of packages scruff https://www.bioconductor.org/packages/release/bioc/html/scruff.html and celda https://www.bioconductor.org/packages/release/bioc/html/celda.html.

[Bioc-devel] 3rd de.NBI/ELIXIR-DE metaRbolomics Hackathon 22.-24.11.2021 @ Wittenberg, Germany

Dear metaRbolomics enthusiasts, We would like to invite you to the three-day face2face “3rd de.NBI/ELIXIR-DE metaRbolomics Hackathon” taking place on 22.- 24.11.2021 at the venerable Leucorea in Lutherstadt Wittenberg. The official program will start Monday 22.11. @ 10:00 (but it is possible to