An analysis with the pkgndep package (https://github.com/jokergoo/pkgndep)
shows
the three heaviest packages are RCy3, clusterExperiment and netSmooth. If
you can
move these three packages to SUGGESTS (where the packages are loaded only
when related
functions are called), I think the number of depe
Hi Shraddha,
>From the rtracklayer perspective, it sounds like Rsamtools is
(indirectly) bringing in those system libraries. I would have expected
zlibbioc to cover the zlib dependency, and perhaps bz2 and lzma
support is optional. Perhaps a core member could comment on that.
In the past, I've us
Hello again,
I'm trying to simplify the dependencies for my package "netDx", make it
easier to install. It's currently got over 200(!) + some Unix libraries
that need to be installed.
1. I ran pkgDepMetrics() from BiocPkgTools to find less-needed pkgs, and
the package with the most dependencies is
Hello BioC community,
Is there a recommended set of tools / workflow for automating build and
check of a package update? I'm currently manually doing this. I've seen
some discussion from 2015 around Travis CI (which I've yet to use) but not
sure if that's current.
If there's a workshop that cover
