Hi Lauren,
Maybe the right key wasn’t added, you need to figure it out with Tim if you
continue with this approach.
Please check if the key added was correct on BiocCredentials, and on your end,
please check if you are using the right key-pair.
Best,
Nitesh
From: "Harmon, Lauren"
Date: Mond
Hi Sarah,
The release branch is meant for bug fixes that ensure the stability of
the code.
It does not usually include 'updates' from the devel.
The way to cleanly do this is to hard reset to a previous commit. The
commit
where your packages version was bumped for the 3.12 release. You
can then
Hi,
I have updated the master branch of my MEAT package yesterday (
https://github.com/sarah-voisin/MEAT), and I tried updating the release
branch as well (RELEASE_3_12), but I must have messed up since the release
branch is now 7 commits behind master and 3 commits ahead, and I am stuck.
How do I
Dear Colleagues:
May Institute on Computation and Statistics for Mass Spectrometry and
Proteomics, taking place on May 3 � May 14, 2021 on the Boston campus of
Northeastern University (online), is now accepting applications.
The program includes tutorials and practical hands-on sessions, presen
Hi,
It's possible you aren't using the correct SSH key?
Why does it show t.triche as the key user?
Best,
Nitesh
On 3/22/21, 2:28 PM, "Bioc-devel on behalf of Harmon, Lauren"
wrote:
Hello,
I have a quick question! I accidentally committed a large file to a
bioconductor repositor
Hello,
I have a quick question! I accidentally committed a large file to a
bioconductor repository, and I am trying to remove it from the history with
bfg. That works fine, but when I try to push my changes, I get this error:
lauren.harmon@C02CG5WTLVDL spiky.git % git push
Enter passphrase f
(sticking bioc-devel back in the recipient list so others can learn / improve /
disagree with this suggestion.)
my suggestion was to memorize the function in your package, not in the example.
Examples are not run independently, but collated into a single file (EWCR-Ex.R
in the EWCR.Rcheck direc
Hi Alan,
It looks like what is slowing everything down significantly is the
approach you've taken to look up the ExperimentHub resources that you
control by name every time you need to access them. E.g:
Look up by name:
> system.time(tt_alzh <- ewceData::tt_alzh())
snapshotDate(): 2021-0
if your examples repeatedly calculate the same thing, and this is also typical
of how users use your package, it might make sense to 'memoise' key functions
in your package https://cran.r-project.org/package=memoise
Martin
On 3/22/21, 7:41 AM, "Bioc-devel on behalf of Kern, Lori"
wrote:
Hi,
You cannot have two maintainers to a package. We operate under the assumption
that there is a single maintainer per package. The user that has access to the
package is �j.chen2�., there are no SSH keys with that username so there is no
access. I�ve deleted the other account with username �r
If your data is using ExperimentHub, it should already be caching the
downloaded data. Once it is downloaded once, it should be using the cached
download for subsequent calls to the hub. We will investigate to ensure that
the caching mechanism is functioning properly on all of our Bioconducto
Hi Nitesh,
Our account is activated already.
Thank you
Best Regards
Raman
On Sat, Mar 20, 2021 at 10:31 PM Nitesh Turaga
wrote:
> Did you activate your account first?
>
>
>
>
>
>
>
> *From: *raman sethi
> *Date: *Friday, March 19, 2021 at 10:33 PM
> *To: *Nitesh Turaga
> *Cc: *Bioc-devel
Hi all,
I am working on the development of [EWCE](https://github.com/NathanSkene/EWCE)
but have hit an issue with R CMD check's runtime. I have been informed this
test needs to be completed in 15 minutes but mine is currently running in ~24
minutes and I am looking for methods to speed this up.
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