Good day,
You are operating with tables of statistical hypothesis test summaries, rather
than input data which the tests are done with, so it doesn't make sense to use
SummarizedExperiment or MultiAssayExperiment. The data is not experimental
measurements. You should try DataFrame from Biocondu
I think the last sentence of your email answers your question? You don't
know how to do this, primarily because you seem not to know anything about
SE or MAE objects, and you need to learn about the latter in order to do
the former. So I would recommend reading up about (probably) MAE objects
and f
Hello Bioc-Devel,
This will be a long winded question and I apologise for that, I just want to be
thorough.
I recently submitted a package onto bioconductor for review, and received a
response to have SummerisedExperiments or MultiAssayExperiments as the standard
format for my package. I looke
Ok, thank you! I guess my mistake was that I went to 1.0 (and even 1.1) too
quickly. I’ll figure it out with the reviewer then. Thanks again!
Cheers,
Roman
> On 31 Jan 2020, at 13:33, Shepherd, Lori
> wrote:
>
> Normally we encourage newly submitted packages to be at 0.99.z when
> submitti
Normally we encourage newly submitted packages to be at 0.99.z when
submitting to Bioconductor so that 1.0.0 represents the release of the
package in Bioconductor.
We have made a few exceptions to this and your reviewer assigned can assist you
with this. Generally if you would like to try t
