Re: [Bioc-devel] Build error due to TensorFlow installation

2019-09-05 Thread Vincent Carey
how about TF for platforms that support it and C++ for those that don't, eventually migrating away from C++ as support grows? a little messy for the moment but let's get some mileage on the TF solution ASAP On Thu, Sep 5, 2019 at 9:21 AM Dirmeier Simon wrote: > Hi Herve, > > > All this means t

Re: [Bioc-devel] Fwd: Re: Build error due to TensorFlow installation

2019-09-05 Thread Martin Morgan
I'm with Simon on the value of using TensorFlow here, and it's too bad the build system is unable to support more flexible use of python (there are additional challenges, for instance inter-operability between packages each depending on & starting their own python interpreter...) It seems like

Re: [Bioc-devel] Build error due to TensorFlow installation

2019-09-05 Thread Dirmeier Simon
Hi Herve, > All this means that if you replace some old C++ code with TensorFlow > then we will need to mark your package as unavailable on Windows and > Mac, at least for now. Sorry. I wonder if there was something wrong > with this old C++ code. I would recommend that you stick to it if you c

Re: [Bioc-devel] Version number error

2019-09-05 Thread Martin Morgan
this needs to be fixed on our end, so please just be patient (I would expect a fix later today...) Martin On 9/5/19, 6:48 AM, "Christopher John" wrote: Still stuck here trying to update. I think I may have been a bit special with my version numbering. Well let me know if the

Re: [Bioc-devel] Fwd: Re: Build error due to TensorFlow installation

2019-09-05 Thread Kasper Daniel Hansen
It might be true that the code is much easier on your end, but it comes with the complexity of using TensorFlow, which is a huge dependency. And that library can be easy or impossible to install depending on your box. I am not saying people shouldn't use TensorFlow, but I am saying it brings a lot

Re: [Bioc-devel] Version number error

2019-09-05 Thread Christopher John
Still stuck here trying to update. I think I may have been a bit special with my version numbering. Well let me know if there is a solution or do I just wait until the next release..(?) remote: Error: Illegal version bump from '1.7.999' to '1.7.1000'. Check remote: http://bioconductor.org/develop

[Bioc-devel] Fwd: Re: Build error due to TensorFlow installation

2019-09-05 Thread Simon Dirmeier
Hi Herve, > All this means that if you replace some old C++ code with TensorFlow > then we will need to mark your package as unavailable on Windows and > Mac, at least for now. Sorry. I wonder if there was something wrong > with this old C++ code. I would recommend that you stick to it if you ca

Re: [Bioc-devel] Version number error

2019-09-05 Thread Martin Morgan
This seems like a bug in the version check code. The next number after '999' is '1000', but '9991' is larger than '999', too, so I think both 1000 and 9991 are valid version bumps; '10' is less than '999' so is not a valid version bump. Note that .99... has no special significance in the third