Re: [Bioc-devel] Bioc-devel Digest, Vol 182, Issue 7

2019-05-08 Thread Martin Morgan
Yes I usually build from source, and don't install, along the lines of mkdir src && cd src && \ svn co https://svn.r-project.org/R/trunk R-devel && \ R-devel/tools/rsync-recommended && \ cd .. mkdir -p bin/R-devel && cd bin/R-devel && \ ~/src/R-devel/configure && \ make -j and immediate

Re: [Bioc-devel] Bioc-devel Digest, Vol 182, Issue 7

2019-05-08 Thread McDavid, Andrew
Off topic, but I am curious how you maintain the parallel installs in your home directory given the Mac binary package's proclivities to dump things into /Library/Frameworks/? Do you compile from source, with appropriate --prefix to keep your installation sandboxed in ~/bin? Andrew McDavid Bi

Re: [Bioc-devel] Bioconductor Git Credentials

2019-05-08 Thread Shepherd, Lori
Hi Josef We had an old email on your account jspid...@bccrc.ca Would you like us to update the account to use your gmail? Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 __