Re: [Bioc-devel] memory exhausted on tokay2

2019-04-06 Thread Pages, Herve
Hi Aaron, Maybe the particular example (plotting) where the "memory exhausted" error occurs is not particularly memory-intensive. However keep in mind 2 important things:   1) 'R CMD check' runs all the examples from all the man pages in the same R session. This means that memory used (and no

Re: [Bioc-devel] celaya2 and merida2 are running different versions of R

2019-04-06 Thread cstrato
Dear Lori, Thank you for this information. Best regards, Christian On 06.04.19 14:12, Shepherd, Lori wrote: I believe ROOT was installed yesterday. It should clear up on the build system over the next two builds Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Departm

Re: [Bioc-devel] celaya2 and merida2 are running different versions of R

2019-04-06 Thread Shepherd, Lori
I believe ROOT was installed yesterday. It should clear up on the build system over the next two builds Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ___

Re: [Bioc-devel] celaya2 and merida2 are running different versions of R

2019-04-06 Thread cstrato
Dear Lori, Since you have just mentioned that users need to satisfy 'celaya2' since 'merida2' will be taken offline shortly, may I remind you that 'xps' is still missing the ROOT framework on 'celaya2', see: https://stat.ethz.ch/pipermail/bioc-devel/2019-February/014670.html Best regards, Chr

[Bioc-devel] memory exhausted on tokay2

2019-04-06 Thread Aaron Taudt
Dear bioconductor-devel, I am trying to fix an "Error: memory exhausted (limit reached?)" error that arises during Rcheck on tokay2 (Windows Server 2012 R2 Standard / x64) . The package builds and passes Rcheck just fine on all other hosts. Is this something I can fix? The function in question is