Dear all,
I met a memory issue for bplapply with SnowParam(). I need to calculate
something from a large matrix many many times. But from the discussions in
https://support.bioconductor.org/p/92587, I learned that bplapply copied
the current and parent environment to each worker thread. Then means
Thank you! I will do as you suggested for the documentation. Still unsure as of
yet about what to do about the Rd warnings regarding BiocGenerics.
As for motifdb, for now I will just not allow the example to run on windows.. I
hope that’s not considered bad form.
Thanks,
Benjamin
> Le 1 janv.
Ah, okey! Very good to know, thank you! Is there a way I can keep track of
this, to see when it gets fixed?
Erik
> On 3 Jan 2019, at 14:00, Martin Morgan wrote:
>
> This seems to be a regression in R-devel, and has been reported.
>
> Previously (at least svn r75833, I think)
>
> df <- data.
Thanks for teaching me how to set a seed for each job!
On Wed, Jan 2, 2019 at 9:45 AM Martin Morgan
wrote:
> I'll back-track on my advice a little, and say that the right way to
> enable the user to get reproducible results is to respect the setting the
> user makes outside your function. So for
This seems to be a regression in R-devel, and has been reported.
Previously (at least svn r75833, I think)
df <- data.frame(vers= package_version("1.2"))
rbind(df, df)$vers
returned
[1] '1.2' '1.2'
now (r75945) we have
> rbind(df, df)$vers
[[1]]
[1] 1 2
[[2]]
[1] 1 2
Martin
On 1/3
We will look at expanding the field out - for now you could either chose one or
use NA
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-d
Hi,
I’m currently updating my package `seqCAT` with some new code, and I always run
it through Travis CI before pushing changes to Bioconductor. The last build
errors with the following message:
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
Error: invalid version
