Re: [Bioc-devel] avoiding circular dependencies between a Data package and a Software package

2018-10-06 Thread Michael Lawrence
I think you're doing the right thing, suggesting the data package from the software package. This might require some manual intervention on the build system side to ensure that the software package is installed before passing full check, so that the data package can be installed/checked and finally

[Bioc-devel] avoiding circular dependencies between a Data package and a Software package

2018-10-06 Thread Tim Triche, Jr.
Last night I submitted MTseeker and its companion package MTseekerData, both festooned with examples that run smoothly and pass BiocCheck. HOWEVER! Breaking up the data into a Data package inadvertently seems to have created a circular dependency between the Software and Data packages. I haven't h