Re: [Bioc-devel] EXTERNAL: troubles with fetching Bioconductor github

2018-08-02 Thread Turaga, Nitesh
Hi, Can you upload a fresh key and try again? Everything on our end seems to be in good shape. Maybe you are using the wrong key. After you upload a new key, please try to make sure you are using the right key. Best, Nitesh > On Aug 2, 2018, at 6:33 PM, Piotr wrote: > > Dear Nitesh, > it

Re: [Bioc-devel] EXTERNAL: troubles with fetching Bioconductor github

2018-08-02 Thread Piotr
Dear Nitesh, it is as follows: dit@dit-N73Jn:~/Desktop/BRAIN$ git remote -v originhttps://github.com/ditti2/BRAIN.git (fetch) originhttps://github.com/ditti2/BRAIN.git (push) upstreamg...@git.bioconductor.org:packages/BRAIN.git (fetch) upstreamg...@git.bioconductor.org:packages/BRA

Re: [Bioc-devel] EXTERNAL: troubles with fetching Bioconductor github

2018-08-02 Thread Turaga, Nitesh
Please copy the result of this, git remote -v and send it to us so we have more information. http://bioconductor.org/developers/how-to/git/faq/ , check #14 Best, Nitesh > On Aug 2, 2018, at 5:14 PM, Piotr wrote: > > Dear All, > > I try to follow instruction here: > https://biocond

[Bioc-devel] troubles with fetching Bioconductor github

2018-08-02 Thread Piotr
Dear All, I try to follow instruction here: https://bioconductor.org/developers/how-to/git/sync-existing-repositories/ however, I find the following git fetch --all Fetching origin Fetching upstream sign_and_send_pubkey: signing failed: agent refused operation Permission denied (publickey). fatal

Re: [Bioc-devel] Is biocLite() working for you right now? Could be a problem on our side. Issue with DelayedArray install with a PC on R 3.5.0

2018-08-02 Thread Leonardo Collado Torres
Thanks Hervé and no problem about the Windows binary. Richard did get DelayedArray installed today (I think using biocLite)! ^^ Best, Leo On Thu, Aug 2, 2018 at 1:59 PM Hervé Pagès wrote: > > Hi Leonardo, > > Hope you were able to solve your connection problems. > Just to let you that I fixed

[Bioc-devel] Updating SSH keys without previous email account

2018-08-02 Thread Anthony Chiu
Hello I maintain the 'twoddpcr' package and I have left my previous institute. I no longer have the SSH keys that I used to push to the Git repository. I never activated my Git credentials account at [1] (I submitted my public key using the Google form during the transition from SVN), and I no lon

[Bioc-devel] SQLForge Question about creating a new species package for Chlamydomonas reinhardtii

2018-08-02 Thread Bijie Ren
Dear all, I wanna create a new annotation package for Chlamydomonas reinhardtii. However, sequencing data in NCBI for this species is not updated while there's a updated version of genome information and annotation in Phytozyome. I'm wondering can I use phytozome ID as an input to create such anno