Hi Jose,
Contributed BSgenome packages get added to the repository of
annotation packages rather than to AnnotationHub (think of
AnnotationHub as a repository of files, not packages). Please
make these BSgenome packages available somewhere and provide us
with a link so we can take a look at them.
Dear all,
I am using htseqtools on the devel version and I get the following error
when using giniCoverage:
test <- lapply(endoExoBamlist, function(bam_files){
return(lapply(bam_files, function(bamfile){
ga <- if(paired)
