I'd be happy to update your annotation package. The package, however, appears
to have multiple warnings and errors occurring on check and BiocCheck. There
appear to be some documentation issues and a test failure in check. For
BiocCheck, just be sure the BiocViews you are using are from one c
Hi,
I'm the TarSeqQC package maintainer. I'have recently sent my new public key
through the google form, I have received an e-mail confirming that my new
key was added but I can't access the Bioconductor repository.
git clone g...@git.bioconductor.org:packages/TarSeqQC
Cloning into 'TarSeqQC'...
On 04/06/2018 10:44 AM, Lluís Revilla wrote:
I have recently faced a similar warning.
This is when a link to a help page of another package is broken (there is
not such help page). Although those could be false positives:
mclapply help page does exists in parallel package.
as.MAList does exists
Hi All,
I've noticed GenVisR is failing to build the vignette on windows for
bioc-devel. the error seems to be:
"Invalid Parameter - /figure-html"
This seems like it may be related to the use of BiocStyle given this post on
stackoverflow:
https://stackoverflow.com/questions/48747959/biocsty
Dear Lluis and Vincent,
Thanks for confirming this in other packages.
In the two examples shown, these must be false positives, as the links
exist. But also the fact that the warnings only appear in Windows suggests
a false positive: I do not understand how this warning would not be
triggered in
I have recently faced a similar warning.
This is when a link to a help page of another package is broken (there is
not such help page). Although those could be false positives:
mclapply help page does exists in parallel package.
as.MAList does exists in devel limma
HTH
On 6 April 2018 at 16:35, V
ive seen this too apropos bigrquery on windows
On Fri, Apr 6, 2018 at 10:22 AM Ramon Diaz-Uriarte
wrote:
>
> Dear All,
>
> Two packages I maintain are showing, in Windows, a warning during check
> with messages like
>
> Rd warning:
> C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp21WlQD/R.INSTALL233
Dear All,
Two packages I maintain are showing, in Windows, a warning during check
with messages like
Rd warning:
C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/Rtmp21WlQD/R.INSTALL23343f935731/OncoSimulR/man/oncoSimulIndiv.Rd:570:
file link 'mclapply' in package 'parallel' does not exist and so has
