IMHO the pedagogic value of a unified document that treats a topic
thoroughly
is quite high. Building the whole workflow on an arbitrary user's system
seems to
me to be a lower priority. Thus using the environment variable in the
build system
to avoid this limit seems an appropriate solution.
On
Thanks Martin. Yes, it's quite unfortunate that scater drags in dplyr and
ggplot2, which - combined with Bioconductor's core packages - already puts us
pretty close to the limit without doing anything else!
A solution might be to split my workflow into self-contained components, each
of which
Hi Aaron,
Yes - sorry, I meant the names of dimnames. Dimnames are indeed checked,
but my code was meant to demonstrate that names of dimnames aren't.
Obviously, it's not the end of the world, but just something I noticed
while I was investigating the glitch.
My second point is not that much abou
On 09/16/2017 01:53 AM, Aaron Lun wrote:
Bumping this rather old thread. To re-iterate, I'm updating my simpleSingleCell
workflow and I'm running into R's DLL limit. I've added a code block halfway
through the workflow that unloads all DLLs and cleans them out, and this works
fine during compi
