Hi Keith,
On 02/08/2017 11:37 AM, Keith Hughitt wrote:
> Greetings,
>
> I came across a couple issues when working with the most recent version of
> GenomicFeatures (Bioconductor 3.5/Github).
>
> 1) The "Resource URL" metadata field is only set via some of the helper
> functions (e.g. makeTxDbFrom
Hi Martin and Hervé,
The problem lies in the pre-built binaries. Installing SGSeq from source
fixes the installation. I bumped the version number for SGSeq to trigger a
rebuild, but I guess other packages are affected as well. Among SGSeq
dependencies it looks like Rsamtools needs a version bump t
Hi Ti-Tai,
The mac binaries for CRAN packages aren't available for R devel yet ...
and at this point may not be until the next release in April. On the
landing page you can see the only mac binaries are for R release:
https://cran.r-project.org/web/packages/RMySQL/index.html
Thanks for keeping a
Hi, all
I got this error from BioC 3.5 Build Report (only Mac OS X Mavericks (10.9.5)):
##
##
###
### Running command:
###
### /Library/Framewo
On 02/09/2017 06:25 AM, Hervé Pagès wrote:
Hi Leonard,
mmh... I can't reproduce this and it doesn't show up on the build report
either. But I got another strange error when I tried to *install*
SGSeq: something about TxFeatures not being able to extend GenomicRanges
because of incompatible type
Hi Leonard,
mmh... I can't reproduce this and it doesn't show up on the build report
either. But I got another strange error when I tried to *install*
SGSeq: something about TxFeatures not being able to extend GenomicRanges
because of incompatible type for the elementMetadata slot.
I got rid of
