Re: [Bioc-devel] Zenodo DOIs for packages released (every 6 months, tied to the Bioc release)

2016-04-15 Thread Laurent Gatto
On 15 April 2016 20:59, Leonardo Collado Torres wrote: > Hi, > > I looked at https://guides.github.com/activities/citable-code/ after > reading http://biorxiv.org/content/early/2016/04/15/048744 (Laurent > Gatto is the 2nd author). > > It got me thinking that maybe with the Bioconductor-mirror's

Re: [Bioc-devel] Zenodo DOIs for packages released (every 6 months, tied to the Bioc release)

2016-04-15 Thread Leonardo Collado Torres
Err, had a few typos. Sorry! On Fri, Apr 15, 2016 at 3:59 PM, Leonardo Collado Torres wrote: > Hi, > > I looked at https://guides.github.com/activities/citable-code/ after > reading http://biorxiv.org/content/early/2016/04/15/048744 (Laurent > Gatto is the 2nd author). > > It got me thinking that

[Bioc-devel] Zenodo DOIs for packages released (every 6 months, tied to the Bioc release)

2016-04-15 Thread Leonardo Collado Torres
Hi, I looked at https://guides.github.com/activities/citable-code/ after reading http://biorxiv.org/content/early/2016/04/15/048744 (Laurent Gatto is the 2nd author). It got me thinking that maybe with the Bioconductor-mirror's at GitHub we could use Zenodo for creating DOI's of Bioconductor's pa

Re: [Bioc-devel] OpenMP on OS X

2016-04-15 Thread Martin Morgan
On 04/15/2016 11:28 AM, Vincent Carey wrote: other packages use #ifdef _OPENMP #include #endif have you tried that? And additional details at https://cran.r-project.org/doc/manuals/r-release/R-exts.html#OpenMP-support On Fri, Apr 15, 2016 at 11:21 AM, Aaron Taudt wrote: Hi, I a

Re: [Bioc-devel] OpenMP on OS X

2016-04-15 Thread Vincent Carey
other packages use #ifdef _OPENMP #include #endif have you tried that? On Fri, Apr 15, 2016 at 11:21 AM, Aaron Taudt wrote: > Hi, > > I am using openmp support in my C++ code and it builds just fine on Windows > and Linux. The morelia build output for OS X however yields the following > er

Re: [Bioc-devel] OpenMP on OS X

2016-04-15 Thread Aaron Taudt
Hi, I am using openmp support in my C++ code and it builds just fine on Windows and Linux. The morelia build output for OS X however yields the following error: In file included from ./R_interface.h:5: ./scalehmm.h:16:10: fatal error: 'libiomp/omp.h' file not found #include // parallelization op