Hi,
In my packages I enabled testing (via testthat) a few weeks ago. I did
so as can be seen in
https://github.com/leekgroup/derfinderHelper/commit/26d9d5543d9082f85bbb2d0ae9f02c5c309b9a48
for the changes to tests/test-all.R You can see that the tests are
actually being run at
http://bioconductor.
Hi,
I have the same problem with changes I recently made in the devel
branch of `derfinder`. The old vignettes were compiled the last time
on November 4th and the new ones on November 12th. Maybe in the next
1-2 days (with the Wednesday nightly build) the old ones will be
dropped.
Cheers,
Leo
O
Well, You shouldn't expect the release branches to change at all based on
anything you do on trunk. They never will.
The release branch is (almost completely frozen), you shouldn't be making
changes there generally. Changes in documentation are a grey area, I
suppose, but I try to avoid those as w
Thanks for your reply! I have already updated the package (also with
bumping version numbers) for many times but these old vignettes are still
there. They even exist in the release branch:
http://www.bioconductor.org/packages/release/bioc/html/ComplexHeatmap.html
On Tue, Nov 17, 2015 at 3:44 PM,
Zuguang,
>From what I can see, you have not updated the version number of your
package, so I suspect you'll find that none of your changes have propogated
at all, though I can't entirely swear to that.
I believe Bioc packages only update in the repo (which I assume is also
when the splash-pages a
Hi everyone,
I got a little confused of what to do next.
Thanks,
Yu
--
ZHANG Yu, PhD
Lecturer, Intelligence Engineering laboratory
College of Computer Science and Technology
Jilin University
2699 Qianjin Street, Changchun, 130012, China
On Tue, Oct 13, 2015 at 9:53 AM, Jim Hester
wrote:
>
> Yu,
Hi,
I am developing a package called ComplexHeatmap and re-format the vignettes
recently. I deleted the old vignettes and created several new vignettes.
But when I look at the web page of the package (
http://bioconductor.org/packages/devel/bioc/html/ComplexHeatmap.html), the
old vignette files (t
