- Original Message -
> From: "Michael Love"
> To: "Dan Tenenbaum" , bioc-devel@r-project.org
> Sent: Friday, August 14, 2015 10:29:18 AM
> Subject: Bioc workflows: using rmarkdown as vignette engine
>
> hi Dan,
>
> (I add bioc-devel as this might be useful info for others)
>
> Is it p
hi Dan,
(I add bioc-devel as this might be useful info for others)
Is it possible to specify rmarkdown as the vignette engine for workflows?
The citation functionality [1] of rmarkdown would be useful, as there
is discussion to have workflows possible submitted as peer reviewed
papers.
I tried
As I understand it, the function sometimes gives false positives (I have
never experience it myself though - Michael Lawrence has, but perhaps his
use cases are more complicated). My guess is that this is a showstopper
for including it in codetools (where it would be great to go, in my
opinion).
Hi,
thanks a lot for the link!, I would definitely try that one...you save
me a lot of time!
On 08/14/2015 10:03 AM, Kasper Daniel Hansen wrote:
> Indeed, you need to use importFrom to selectively import.
>
> In this process you'll realize how great it would be to have a
> function called
> i
On Fri, Aug 14, 2015 at 10:03 AM, Kasper Daniel Hansen <
kasperdanielhan...@gmail.com> wrote:
> Indeed, you need to use importFrom to selectively import.
>
> In this process you'll realize how great it would be to have a function
> called
> importEverythingFromExcept( PACKAGE, NOT_THESE_FUNCTIO
Indeed, you need to use importFrom to selectively import.
In this process you'll realize how great it would be to have a function
called
importEverythingFromExcept( PACKAGE, NOT_THESE_FUNCTIONS)
but last time I raised this issue on R-devel, I was gently shut down.
In the meantime you should us
Hi,
I am trying to get right my new package
(http://github.com/lpantano/isomiRs). But I am having some problems with
the packages I import.
The main problem is that I get warnings while loading my packages
because some dplyr replaces functions in others packages like S4Vectors
and others.
