Hi,
Thanks for the report. Now fixed in 1.13.31.
This problem, like the last one you reported, was related to CDSID
becoming an IntegerList. When region=AllVariants, results are combined
and ordered by QUERYID, TXID, CDSID and GENEID. In your example ties
were not broken by QUERYID or TXID an
hi Valerie,
i'm afraid i have hit another cryptic error in locateVariants() related
to some recent update of the devel version of the package, could you
take a look at it? (code below..)
thanks!!
robert.
==
library(VariantAnnotation)
library(TxDb.Hsa
Hi Vince,
I haven't looked too much at the OrganismDb stuff yet. Just let me know
when you run into any major roadblocks for a Gviz patch. We could refactor
some things to make it work.
FLorian
On 13/02/15 19:01, "Vincent Carey" wrote:
>Gviz has a nice way of working with TxDb instances to deriv
