Re: [Bioc-devel] viewMedians

2014-06-03 Thread Peter Haverty
rangeColMeans (or rangeMeans) takes a vector, but can recycle over columns in a matrix. I guess we could have rangeMeans for vector-ish things, rangeColMeans and rangeRowMeans for two-d things. I have rangeMeans for Rles and RleDataFrame, which does each Rle. I'm flexible on naming. Pete ___

Re: [Bioc-devel] viewMedians

2014-06-03 Thread Michael Lawrence
Yea. The performance profile of rowsum() is terrible in that example. It would actually be faster to convert the CompressedIntegerList into an ordinary list and lapply over it. On Mon, Jun 2, 2014 at 11:00 PM, Hervé Pagès wrote: > There is a lot going on with respect to the view* stuff, and y