Re: [Bioc-devel] Rsubread build error

2013-03-28 Thread Martin Morgan
On 03/28/2013 08:36 PM, Wei Shi wrote: Dear Bioc core team, Our Rsubead package got a build error on george2, but we could not reproduce the error on our local linux machine. It is successfully built and installed on our linux computer. Is it possible that you can give us more information abou

Re: [Bioc-devel] Rsubread build error

2013-03-28 Thread Dan Tenenbaum
On Thu, Mar 28, 2013 at 8:36 PM, Wei Shi wrote: > Dear Bioc core team, > > Our Rsubead package got a build error on george2, but we could not reproduce > the error on our local linux machine. It is successfully built and installed > on our linux computer. Is it possible that you can give us more

[Bioc-devel] Rsubread build error

2013-03-28 Thread Wei Shi
Dear Bioc core team, Our Rsubead package got a build error on george2, but we could not reproduce the error on our local linux machine. It is successfully built and installed on our linux computer. Is it possible that you can give us more information about what might cause this error? Many tha

Re: [Bioc-devel] graphite build error on George2

2013-03-28 Thread Dan Tenenbaum
On Thu, Mar 28, 2013 at 6:28 AM, Enrica wrote: > Dear Martin, > > we tried that and everything worked correctly. > > As I was trying to stress in my previous message, we are unable to > reproduce that segfault reported in george2 build logs. In other > terms, george2 is the only host to our knowle

Re: [Bioc-devel] graphite build error on George2

2013-03-28 Thread Enrica
Dear Martin, we tried that and everything worked correctly. As I was trying to stress in my previous message, we are unable to reproduce that segfault reported in george2 build logs. In other terms, george2 is the only host to our knowledge exhibiting such problem. It is hard for us to make any

Re: [Bioc-devel] graphite build error on George2

2013-03-28 Thread Martin Morgan
On 03/28/2013 05:40 AM, Martin Morgan wrote: On 03/28/2013 03:20 AM, Enrica wrote: Dear Bioconductor, I'm one of the authors of the graphite package. I've noticed that the build host george2 seems to have a problem building the package. In particular, it seems there is a segmentation fault cau

Re: [Bioc-devel] graphite build error on George2

2013-03-28 Thread Martin Morgan
On 03/28/2013 03:20 AM, Enrica wrote: Dear Bioconductor, I'm one of the authors of the graphite package. I've noticed that the build host george2 seems to have a problem building the package. In particular, it seems there is a segmentation fault caused by the function sp_moralize(). This belong

[Bioc-devel] graphite build error on George2

2013-03-28 Thread Enrica
Dear Bioconductor, I'm one of the authors of the graphite package. I've noticed that the build host george2 seems to have a problem building the package. In particular, it seems there is a segmentation fault caused by the function sp_moralize(). This belongs to the CRAN package gRbase, which we i