Re: Running BLAST using RemoteBlast.pm

2004-07-20 Thread Jane Sun
Jane Sun <[EMAIL PROTECTED]> wrote:Hi, Sean; Thank you very much for your sooner reply. While that's what I mean: I checked this tutorial document and it only shows how to run RemoteBlast with a FASTA sequence FILE (*.fasta, for example a protein sequence file with annotation line, protein a

Re: Running BLAST using RemoteBlast.pm

2004-07-20 Thread Sean Davis
Jane, You should probably look at the BioPerl tutorial (http://www.bioperl.org/Core/Latest/ bptutorial.html#iii.4.1_running_blast_(using_remoteblast.pm). There are many tools for doing such things. Sean On Jul 20, 2004, at 12:08 PM, Jane Sun wrote: Where can I find the examples or source cod

Running BLAST using RemoteBlast.pm

2004-07-20 Thread Jane Sun
Where can I find the examples or source code for running BLAST with a input SEQUENCE using RemoteBlast.pm? >From the bioperl online documentation, I can only get the example on running BLAST >with a sequnce FILE using RemoteBlast.pm Thanks in advance. Jane _