On Wednesday 19 May 2004 05:25 pm, Michael Robeson wrote:
> Sorry, I meant to upload this script (see below). However, I have one
> last question. Why can't I use
>
> s/\n//g;# instead of
>
> tr/A-Za-z-//cd;
>
>
>
> in the script below? I thought it would be simpler to remove the
> newline char
Sorry, I meant to upload this script (see below). However, I have one
last question. Why can't I use
s/\n//g;# instead of
tr/A-Za-z-//cd;
in the script below? I thought it would be simpler to remove the
newline characters from $_ which is all I really want to do. However,
most of the time
Thanks to those that helped. The code works great. Now I will practice
one honing it down to the bare essentials. Below is the final code you
all helped with.
-Thanks a million!
-Mike
>>> Begin PERL Code<<<
#! /usr/bin/perl -w
use strict;
use FileHandle;
my %organisms;
print "Enter in a list of
Hi,
See code
On Tue, 18 May 2004 13:16:37 -0400, Michael Robeson <[EMAIL PROTECTED]>
wrote:
Ok great. Most of what you show does make sense. However, there are some
bits of code that I need further clarification with. Some bits I am able
to tell what they are doing but I do not quite know ho
Quite a unique case.
If your data is no very huge I would suggest, you just first keep on
reading all data into a huge has ( key as the animal value as the data)
and then just print out the hash into files
like ( writing pseudo code is easier if written in perl :-) )
my @files = qw(file1 file2 fi
Ok great. Most of what you show does make sense. However, there are
some bits of code that I need further clarification with. Some bits I
am able to tell what they are doing but I do not quite know how or why
they work they way they do. I'll state these areas in the code we've
got together at t
> Well this is the best I could do thinking through what you said. This
> is actually my first time working with hashes. Also, I am
> still a PERL
> newbie. So, I guess a little helpful code would go a long way. I just
> can't figure out how to link the regular expressions to the hash when
> s
Well this is the best I could do thinking through what you said. This
is actually my first time working with hashes. Also, I am still a PERL
newbie. So, I guess a little helpful code would go a long way. I just
can't figure out how to link the regular expressions to the hash when
searching thro
On Sun, 16 May 2004 19:50:57 -0400, Michael S. Robeson II
<[EMAIL PROTECTED]> wrote:
Hi all,
Hello and Welcome to the world of bioinformatics with perl!
...
I think you should take a look at bioperl since this is genome data, for
this exercise it's not what you want, but if you want to do more
> Hi all,
Hi Michael,
>
> I am having trouble with combining data from several files,
> and I can't
> even figure out how to get started. So, I am NOT asking for any code
> (though pseudo-code is ok) as I would like to try figuring
> this problem
> out myself. So, if anyone can give me an
* "Michael S. Robeson II" <[EMAIL PROTECTED]> [2004-05-17T07:47:57]
> I am having trouble with combining data from several files, and I can't
> even figure out how to get started. So, I am NOT asking for any code
> (though pseudo-code is ok) as I would like to try figuring this problem
> out
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