code syntax !

2007-12-14 Thread Auxence Sima
this was my original code, and someone brought my attention to the fact that i did not assign any value to my hashes ( %sequences ). i figure he was absolutely right ( thank you for your help ). I have came up with a value for my %sequences, but i would like to make sure i did it right. Again

Perl Code

2007-12-11 Thread Auxence Sima
Hi everyone. I d like to have u guys input about my code. Im writing a perl script that would generate some primers. my input file calles " output.txt ) was generated from primer3. if u guys can take a look at my script and tell me what u detect that needs to be correcte/ or something that

About FASTA file

2007-11-07 Thread Auxence Sima
i have Sequence Data in a file that i named " OUTPUT.TXT",and hereis my question. I would like to create a FASTA data file, and i wonder how to process. do i have to just take out the info inside the OUTPUT.TXT, and keep only Sequences, and then put them ina FASTA format?? DO i keep the sam

Re: Perl script

2007-07-25 Thread Auxence Sima
Chas Owens <[EMAIL PROTECTED]> wrote:On 7/24/07, Auxence Sima wrote: > Hello everyone ! I have this question: can anyone give me > an idea of how i can do this. Im trying to figure out how to > run Primer3 in batch mode from the Linux command line, > and then process the

Perl script

2007-07-24 Thread Auxence Sima
Hello everyone ! I have this question: can anyone give me an idea of how i can do this. Im trying to figure out how to run Primer3 in batch mode from the Linux command line, and then process the result from a perl script ( which i have to write). any idea how to generate primers for many sequenc