Re: [OMPI users] mpicc command not found - Fedora

[Trent]

Try "yum search openmpi" instead.



Or as someone else suggested you download, compile, and install the source
and you could have already been on your way to using OpenMPI in a few
moments.



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Rohan Deshpande
Sent: Friday, March 30, 2012 7:39 AM
To: Open MPI Users
Subject: Re: [OMPI users] mpicc command not found - Fedora



Hi,

I do not know how to use ortecc. 

After looking at the details i found that yum install did not install
openmpi-devel package. 

yum cannot find it either - yum search openmpi-devel says not match found.

I am using Red Hat 6.2 and i686 processors. 

which mpicc shows - 

which: no mpicc in
(/usr/lib/qt-3.3/bin:/usr/local/ns-allinone/bin:/usr/local/ns-allinone/tcl8.
4.18/unix:/usr/local/ns-allinone/tk8.4.18/unix:/usr/local/cuda/cuda/bin:/usr
/local/bin:/usr/bin:/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/lib/openmpi/bi
n)

rpmquery -l openmpi-devel   says package not installed

What could be the possible solution? 



On Fri, Mar 30, 2012 at 2:05 AM, Amit Ghadge  wrote:

You can try source packaged. Extract and run command ./configure
--prefix=usr/local , make all , make install after to compile any mpi
program by using mpicc 

On 29-Mar-2012 7:26 PM, "Jeffrey Squyres"  wrote:

I don't know exactly how Fedora packages Open MPI, but I've seen some
distributions separate Open MPI into a base package and a "devel" package.
And mpicc (and some friends) are split off into that "devel" package.

The rationale is that you don't need mpicc (and friends) to *run* Open MPI
applications -- you only need mpicc (etc.) to *develop* Open MPI
applications.

Poke around and see if you can find a devel-like Open MPI package in Fedora.


On Mar 29, 2012, at 7:45 AM, Rohan Deshpande wrote:

> Hi,
>
> I have installed mpi successfully on fedora using yum install openmpi
openmpi-devel openmpi-libs
>
> I have also added /usr/lib/openmpi/bin to PATH and LD_LIBRARY_PATH
variable.
>
> But when I try to complie my program using mpicc hello.c or
/usr/lib/openmpi/bin/mpicc hello.c I get error saying mpicc: command not
found
>
> I checked the contents of /user/lib/openmpi/bin and there is no mpicc...
here is the screenshot
>
> 
>
>
> The add/remove  programs show the installation details
>
>  
>
> I have tried re installing but same thing happened.
>
> Can someone help me to solve this issue?
>
> Thanks
> --
>
> Best Regards,
>
> ROHAN
>
>
>
> ___
> users mailing list
> us...@open-mpi.org
> http://www.open-mpi.org/mailman/listinfo.cgi/users


--
Jeff Squyres
jsquy...@cisco.com
For corporate legal information go to:
http://www.cisco.com/web/about/doing_business/legal/cri/


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




-- 


Best Regards,


ROHAN DESHPANDE  

Re: [OMPI users] OpenMPI and CUDA on cluster

[Trent]

That is discussed on here:



http://forums.nvidia.com/index.php?showtopic=227854



Maybe that could be your issue too.







From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Rohan Deshpande
Sent: Tuesday, May 01, 2012 4:04 AM
To: Open MPI Users
Subject: [OMPI users] OpenMPI and CUDA on cluster



Hi, 

I am trying to execute OpenMPI and CUDA code on a cluster. The code works
fine on single machine but when I try to execute it on cluster I get error: 

error while loading shared libraries: libcudart.so.4: cannot open shared
object file: No such file or directory

I checked my PATH and LD_PATH and it looks ok. I have a .bashrc file which
contains following entries -

export PATH=$PATH:/usr/local/lib/:/usr/local/lib/openmpi:/usr/local/
cuda/bin
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/local/lib:/usr/local/
lib/openmpi/:/usr/local/cuda/lib/:

All the machines haves same installation of CUDA and OpenMPI. 

Can anyone help me with this. 

This problem is really annoying.

Thanks. 

Re: [OMPI users] send message twice

[Trent Creekmore]

I find issues like this is related to security issue. Firewall, not enough
access privilege, SE Linux, etc.







From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of ???
Sent: Monday, September 13, 2010 12:04 AM
To: us...@open-mpi.org
Subject: [OMPI users] send message twice



Hi all.

I have some problem with sending messages. I want to send 2 messages to
each node.

for example, send 2 messages to 2 nodes,

if (rank == 0) {
for (dest = 1; dest < numProcs; dest++) {
MPI_Send(&a, 1, MPI_INT, dest, 1, MPI_COMM_WORLD);
MPI_Send(&b, 1, MPI_INT, dest, 2, MPI_COMM_WORLD);
}

} else {
MPI_Recv(&a_recv, 1, MPI_INT, 0, 1, MPI_COMM_WORLD, &status);
MPI_Recv(&b_recv, 1, MPI_INT, 0, 2, MPI_COMM_WORLD, &status);
}

but it doesn't work well. Only first message(sending data "a" to node1) is
sent successfully, but the rest 3 transmissions(sending data "b" to node1
and sending data "a" and "b" to node2) have no response which seems to be
deadlock. There are no runtime error.

The version 1.4.1 has been used.


best regards,
hyo


 

Re: [OMPI users] link problem on 64bit platform

[Trent Creekmore]

Have you tried using mpicxx, or mpic++ ?



-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of jody
Sent: Monday, November 01, 2010 4:20 AM
To: Open MPI Users
Subject: [OMPI users] link problem on 64bit platform

Hi
On a newly installed 64bit linux (2.6.32-gentoo-r7) with gcc version 4.4.4
i can't compile even simple Open-MPI applications (OpenMPI 1.4.2).

The message is:
jody@aim-squid_0 ~/progs $ mpiCC -g -o HelloMPI HelloMPI.cpp
/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../x86_64-pc-linux-gnu/bin/l
d:
skipping incompatible /opt/openmpi-1.4.2/lib/libmpi_cxx.so when
searching for -lmpi_cxx
/usr/lib/gcc/x86_64-pc-linux-gnu/4.4.4/../../../../x86_64-pc-linux-gnu/bin/l
d:
cannot find -lmpi_cxx
collect2: ld returned 1 exit status

I am using the 64bit mpiCC:
jody@aim-squid_0 ~/progs $ which mpiCC
/opt/openmpi/bin/mpiCC
jody@aim-squid_0 ~/progs $ ls -l /opt/openmpi
lrwxrwxrwx 1 root root 22 Nov  1 09:56 /opt/openmpi ->
/opt/openmpi-1.4.2-64/

The mpi_cxx should be found in the lib subdirectory:
jody@aim-squid_0 ~/progs $ ls -l /opt/openmpi/lib/libmpi_cxx*
-rwxr-xr-x 1 root root   1073 Jun 24 15:50 /opt/openmpi/lib/libmpi_cxx.la
lrwxrwxrwx 1 root root 19 Jun 24 15:50
/opt/openmpi/lib/libmpi_cxx.so -> libmpi_cxx.so.0.0.1
lrwxrwxrwx 1 root root 19 Jun 24 15:50
/opt/openmpi/lib/libmpi_cxx.so.0 -> libmpi_cxx.so.0.0.1
-rwxr-xr-x 1 root root 137442 Jun 24 15:50
/opt/openmpi/lib/libmpi_cxx.so.0.0.1

PATH and LD_LIBRARY_PATH contain the correct paths:
jody@aim-squid_0 ~/progs $ echo $PATH
/opt/openmpi/bin:/usr/local/bin:/usr/local/bin:/usr/bin:/bin:/opt/bin:/usr/x
86_64-pc-linux-gnu/gcc-bin/4.4.4
jody@aim-squid_0 ~/progs $ echo $LD_LIBRARY_PATH
/opt/openmpi/lib:

AM i missing something?

Thank You
  jody
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

Re: [OMPI users] Building MPI on Windows

[Trent Creekmore]

This may, or may not be helpful, but I have tried the Windows offerings. I have 
never gotten anything to function was expected. Compiling, or the available 
binaries. I think they just don’t work at all.

 

My suggestion which I feel would be easier, and less headache way would be to 
install something like CygWin, which would give you a Unix/Linux like 
environment running under Windows. 

You would only need to compile it in CygWin just like the Linux/Unix docs say 
to do. 

 

I don’t know if anyone else has done it this way or not.

 

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 1:32 PM
To: us...@open-mpi.org
Subject: [OMPI users] Building MPI on Windows

 

Hi, 

 

I’m trying to follow the ReadMe file to build OpenMPI on Windows:

 

Step 1: Untar the contrib/platform/win32/ompi-static.tgz tarball in the root 
directory of the Open MPI distribution.

I do not have ompi-static.tgz in the mentioned path.

 

Step 2: Go in the ompi/datatype subdirectory in the Open MPI distribution and 
copy the following:   

datatype_pack.c   to datatype_pack_checksum.c 

datatype_unpack.c to datatype_unpack_checksum.c

I do not see these files in the mentioned path.

 

Step 4: Open the Open MPI project (.sln file) from the root directory of the 
distribution.

I don’t have a .sln file anywhere

 

Help anyone? Shiqing?

 

Thanks,

Vimal

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 11:21 AM
To: f...@hlrs.de
Cc: us...@open-mpi.org
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

 

I did make uninstall. I also deleted the folders of the other implementation.

I ran ./configure and make all install.

At the end of the make I saw a bunch of errors for the makefiles. I’ve attached 
the .log and .out files.

 

Please tell me if I’m on the right track.

 

Thanks,

Vimal

 

From: Shiqing Fan [mailto:f...@hlrs.de] 
Sent: Wednesday, June 13, 2012 9:37 AM
To: Mathew, Vimal
Cc: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

 

Hi Vimal,

I'm not sure how you can uninstall  the other one, may be 'make uninstall' from 
the source? Or you may also ask in their mailing list.

Another solution might use the full path for the executables, like "c:\Program 
Files\OpenMPI_v1.6-win32\bin\mpicc hello.c" or under Cygwin: 
"/cygdrive/c/Program\ Files/OpenMPI_v1.6-win32/bin/mpicc.exe hello.c".

Of course, I suggest to get rid of the other MPI implementation.

Shiqing


On 2012-06-13 3:17 PM, vimalmat...@eaton.com wrote: 

Hi Shiqing,

 

I installed the LAN/MPI implementation first then the Open MPI implementation.

Could this be the problem? If yes, how do I get rid of the LAN/MPI 
implementation?

 

Thanks,

Vimal

 

From: Shiqing Fan [mailto:f...@hlrs.de] 
Sent: Wednesday, June 13, 2012 4:49 AM
To: Open MPI Users
Cc: Mathew, Vimal
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

 

Hi Vimal,

The output looks strange. If you use the installer under Cygwin, mpicc 
shouldn't try to link with liblammpio.* or any library in /usr/local/lib. So I 
guess the mpicc is messed up with some previously installed MPI 
implementations. Could you please verify that 'which mpicc' is the one you 
installed?

Anyway, here I sent some screen shots that how it should look like under Cygwin.

1 - run command 'mpicc chello.c'

2 - run command 'mpicc chello.c -o chello'

Regards,
Shiqing


  
On 2012-06-12 8:44 PM, vimalmat...@eaton.com wrote: 

I ran OpenMPI_v1.6-1_win64.exe.
 Now I get this message:
C9995799@SOUMIWHP5003567 ~/openmpi-1.6
$ mpicc hello.c -o hello
WARNING: mpicc expected to find liblammpio.* in /usr/local/lib
WARNING: MPI-2 IO support will be disabled
gcc: hello.c: No such file or directory
mpicc: No such file or directory
--
Vimal
 
 
-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:30 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)
 
Probably easier to just run the Open MPI binary installer.
 
 
On Jun 12, 2012, at 2:24 PM,   
 wrote:
 

So I simply download and run OpenMPI_v1.6-1_win64.exe?
Or is there a way to fix the Fortran compiler?
 
--
Vimal
 
 
-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] 
On Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:20 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not 
found)
 
It does not look like you successfully built Open MPI -- it looks like

 

Open MPI's configure script aborted because your Fortran compiler 
wasn't
behaving:
 
-
checking if Fortran 77 compiler supports COMPLEX*16... yes 

Re: [OMPI users] Building MPI on Windows

[Trent Creekmore]

I just gave up and stuck with Unix/Linux.  Eclipse IDE offers a very nice 
plugin for developing and debugging MPI code named Parallel Tools Platform. 
Something not available in Visual Studio, except for similar one made by Intel, 
but I believe you have to use their compiler.

 

You could always run Eclipse remotely from any Windows OS using a Secure Shell 
client and Xming (A Windows based X Server). That is what I do, and no more 
wasting time trying to get OMPI trying to run on Windows.

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:09 PM
To: us...@open-mpi.org; us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

I've tried the Cygwin way.
Been hitting roadblocks for a week now. I've just uninstalled everything and 
started from scratch again.

--
Vimal


-Original Message-
From: users-boun...@open-mpi.org on behalf of Trent Creekmore
Sent: Wed 6/13/2012 2:47 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

This may, or may not be helpful, but I have tried the Windows offerings. I have 
never gotten anything to function was expected. Compiling, or the available 
binaries. I think they just don't work at all.



My suggestion which I feel would be easier, and less headache way would be to 
install something like CygWin, which would give you a Unix/Linux like 
environment running under Windows.

You would only need to compile it in CygWin just like the Linux/Unix docs say 
to do.



I don't know if anyone else has done it this way or not.





From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 1:32 PM
To: us...@open-mpi.org
Subject: [OMPI users] Building MPI on Windows



Hi,



I'm trying to follow the ReadMe file to build OpenMPI on Windows:



Step 1: Untar the contrib/platform/win32/ompi-static.tgz tarball in the root 
directory of the Open MPI distribution.

I do not have ompi-static.tgz in the mentioned path.



Step 2: Go in the ompi/datatype subdirectory in the Open MPI distribution and 
copy the following:  

datatype_pack.c   to datatype_pack_checksum.c

datatype_unpack.c to datatype_unpack_checksum.c

I do not see these files in the mentioned path.



Step 4: Open the Open MPI project (.sln file) from the root directory of the 
distribution.

I don't have a .sln file anywhere



Help anyone? Shiqing?



Thanks,

Vimal



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 11:21 AM
To: f...@hlrs.de
Cc: us...@open-mpi.org
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



I did make uninstall. I also deleted the folders of the other implementation.

I ran ./configure and make all install.

At the end of the make I saw a bunch of errors for the makefiles. I've attached 
the .log and .out files.



Please tell me if I'm on the right track.



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 9:37 AM
To: Mathew, Vimal
Cc: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

I'm not sure how you can uninstall  the other one, may be 'make uninstall' from 
the source? Or you may also ask in their mailing list.

Another solution might use the full path for the executables, like "c:\Program 
Files\OpenMPI_v1.6-win32\bin\mpicc hello.c" or under Cygwin: 
"/cygdrive/c/Program\ Files/OpenMPI_v1.6-win32/bin/mpicc.exe hello.c".

Of course, I suggest to get rid of the other MPI implementation.

Shiqing


On 2012-06-13 3:17 PM, vimalmat...@eaton.com wrote:

Hi Shiqing,



I installed the LAN/MPI implementation first then the Open MPI implementation.

Could this be the problem? If yes, how do I get rid of the LAN/MPI 
implementation?



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 4:49 AM
To: Open MPI Users
Cc: Mathew, Vimal
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

The output looks strange. If you use the installer under Cygwin, mpicc 
shouldn't try to link with liblammpio.* or any library in /usr/local/lib. So I 
guess the mpicc is messed up with some previously installed MPI 
implementations. Could you please verify that 'which mpicc' is the one you 
installed?

Anyway, here I sent some screen shots that how it should look like under Cygwin.

1 - run command 'mpicc chello.c'

2 - run command 'mpicc chello.c -o chello'

Regards,
Shiqing


 
On 2012-06-12 8:44 PM, vimalmat...@eaton.com wrote:

I ran OpenMPI_v1.6-1_win64.exe.
 Now I get this message:
C9995799@SOUMIWHP5003567 ~/openmpi-1.6
$ mpicc hello.c -o hello
WARNING: mpicc expected to find

Re: [OMPI users] Building MPI on Windows

[Trent Creekmore]

I have never been able to get that installer to function. It always reports
some error, and fails.   I have tried it on different systems.  





From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Ralph Castain
Sent: Wednesday, June 13, 2012 2:32 PM
To: Open MPI Users
Subject: Re: [OMPI users] Building MPI on Windows



I'm not a Windozer, so I can't speak to the port for that platform. However,
the conversation here seems strange to me. Have you actually read the
instructions on the open-mpi.org web site?



Looks pretty simple to me. You download the .exe installer for either 32 or
64 bits, and run it. You don't build OMPI from source - the distro contains
everything you need to just run.



See:



http://www.open-mpi.org/software/ompi/v1.6/



for the software and some Windows notes.





On Jun 13, 2012, at 1:20 PM, Trent Creekmore wrote:





I just gave up and stuck with Unix/Linux.  Eclipse IDE offers a very nice
plugin for developing and debugging MPI code named Parallel Tools Platform.
Something not available in Visual Studio, except for similar one made by
Intel, but I believe you have to use their compiler.



You could always run Eclipse remotely from any Windows OS using a Secure
Shell client and Xming (A Windows based X Server). That is what I do, and no
more wasting time trying to get OMPI trying to run on Windows.



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:09 PM
To: us...@open-mpi.org; us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows



I've tried the Cygwin way.
Been hitting roadblocks for a week now. I've just uninstalled everything and
started from scratch again.

--
Vimal


-Original Message-
From: users-boun...@open-mpi.org on behalf of Trent Creekmore
Sent: Wed 6/13/2012 2:47 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

This may, or may not be helpful, but I have tried the Windows offerings. I
have never gotten anything to function was expected. Compiling, or the
available binaries. I think they just don't work at all.



My suggestion which I feel would be easier, and less headache way would be
to install something like CygWin, which would give you a Unix/Linux like
environment running under Windows.

You would only need to compile it in CygWin just like the Linux/Unix docs
say to do.



I don't know if anyone else has done it this way or not.





From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 1:32 PM
To: us...@open-mpi.org
Subject: [OMPI users] Building MPI on Windows



Hi,



I'm trying to follow the ReadMe file to build OpenMPI on Windows:



Step 1: Untar the contrib/platform/win32/ompi-static.tgz tarball in the root
directory of the Open MPI distribution.

I do not have ompi-static.tgz in the mentioned path.



Step 2: Go in the ompi/datatype subdirectory in the Open MPI distribution
and copy the following:  

datatype_pack.c   to datatype_pack_checksum.c

datatype_unpack.c to datatype_unpack_checksum.c

I do not see these files in the mentioned path.



Step 4: Open the Open MPI project (.sln file) from the root directory of the
distribution.

I don't have a .sln file anywhere



Help anyone? Shiqing?



Thanks,

Vimal



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 11:21 AM
To: f...@hlrs.de
Cc: us...@open-mpi.org
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



I did make uninstall. I also deleted the folders of the other
implementation.

I ran ./configure and make all install.

At the end of the make I saw a bunch of errors for the makefiles. I've
attached the .log and .out files.



Please tell me if I'm on the right track.



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 9:37 AM
To: Mathew, Vimal
Cc: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

I'm not sure how you can uninstall  the other one, may be 'make uninstall'
from the source? Or you may also ask in their mailing list.

Another solution might use the full path for the executables, like
"c:\Program Files\OpenMPI_v1.6-win32\bin\mpicc hello.c" or under Cygwin:
"/cygdrive/c/Program\ Files/OpenMPI_v1.6-win32/bin/mpicc.exe hello.c".

Of course, I suggest to get rid of the other MPI implementation.

Shiqing


On 2012-06-13 3:17 PM, vimalmat...@eaton.com wrote:

Hi Shiqing,



I installed the LAN/MPI implementation first then the Open MPI
implementation.

Could this be the problem? If yes, how do I get rid of the LAN/MPI
implementation?



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012

Re: [OMPI users] Building MPI on Windows

[Trent Creekmore]

There is no complete documentation. It is things I had to figure out along the 
way..

 

I guess I could help some.

 

 

1)  Of course get A SSH client. I personally prefer SSH Secure Shell Client 
(Version 3.2.9.)  by SSH Security Corporation. This one is free, but no longer 
available or supported by them. However you may be able to find it online 
somewhere. Or you can use Putty. Then set the client up for X-Forwarding.

2)  Get X-Ming  <http://sourceforge.net/projects/xming/> 
http://sourceforge.net/projects/xming/  Install it, and you only need to run 
it, nothing else.

3)   Get Eclipse:   <http://www.eclipse.org/downloads/> 
http://www.eclipse.org/downloads/ Download the Eclipse IDE for Parallel 
Application Developers (includes Incubating components) version. Pick 32 or 64 
bit.

Eclipse will need to be run on the remote machine. No installation is needed . 
Just extract it into the folder of your choosing.  Eclipse requires Java. If 
Java is not installed on the machine, you will need to install it, or if you 
cannot you can download Java, extract it,  and place a certain Java .so file in 
a subdirectory of Eclipse. It will tell you if Java is missing, and what 
location it is looking at, including the name of the .so file it is looking 
for. So you will be able to know what file you need and where to place it

4)  To run Eclipse, using your SSH Client w/X-Forwarding on, and Xming 
running, log into the remote system. Go to your Eclipse folder then type 
“eclipse” (no quotes) and it should start running and you will see the GUI 
popup unless there is an issue in #3 with Java. Instead you will see an error 
about Java which you will need to fix.

 

 

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:25 PM
To: us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

Could you please give me links to documentation that you followed when you set 
it up, Trent?

 

Thanks,

Vimal 

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Trent Creekmore
Sent: Wednesday, June 13, 2012 3:20 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

 

I just gave up and stuck with Unix/Linux.  Eclipse IDE offers a very nice 
plugin for developing and debugging MPI code named Parallel Tools Platform. 
Something not available in Visual Studio, except for similar one made by Intel, 
but I believe you have to use their compiler.

 

You could always run Eclipse remotely from any Windows OS using a Secure Shell 
client and Xming (A Windows based X Server). That is what I do, and no more 
wasting time trying to get OMPI trying to run on Windows.

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:09 PM
To: us...@open-mpi.org; us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

I've tried the Cygwin way.
Been hitting roadblocks for a week now. I've just uninstalled everything and 
started from scratch again.

--
Vimal


-Original Message-
From: users-boun...@open-mpi.org on behalf of Trent Creekmore
Sent: Wed 6/13/2012 2:47 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

This may, or may not be helpful, but I have tried the Windows offerings. I have 
never gotten anything to function was expected. Compiling, or the available 
binaries. I think they just don't work at all.



My suggestion which I feel would be easier, and less headache way would be to 
install something like CygWin, which would give you a Unix/Linux like 
environment running under Windows.

You would only need to compile it in CygWin just like the Linux/Unix docs say 
to do.



I don't know if anyone else has done it this way or not.





From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 1:32 PM
To: us...@open-mpi.org
Subject: [OMPI users] Building MPI on Windows



Hi,



I'm trying to follow the ReadMe file to build OpenMPI on Windows:



Step 1: Untar the contrib/platform/win32/ompi-static.tgz tarball in the root 
directory of the Open MPI distribution.

I do not have ompi-static.tgz in the mentioned path.



Step 2: Go in the ompi/datatype subdirectory in the Open MPI distribution and 
copy the following:  

datatype_pack.c   to datatype_pack_checksum.c

datatype_unpack.c to datatype_unpack_checksum.c

I do not see these files in the mentioned path.



Step 4: Open the Open MPI project (.sln file) from the root directory of the 
distribution.

I don't have a .sln file anywhere



Help anyone? Shiqing?



Thanks,

Vimal



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 11:21 AM
To: f...

Re: [OMPI users] Building MPI on Windows

[Trent Creekmore]

I find the easiest way to know if LIB and DLL function correctly, and avoiding  
confusion on correct setup is it just drop them all in the root directory of 
your project. VS should see them upon load of that project.

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:47 PM
To: us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

Yes, and then I added the libraries folder in Visual Studio under Project 
Properties>Linker>General>Additional Library Directories.

I tried compiling simple ‘Hello World’’ code and I get an error message saying 
‘Cannot open : No such file or directory.

 

What step am I missing?

 

--

Vimal

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Damien
Sent: Wednesday, June 13, 2012 3:43 PM
To: Open MPI Users
Subject: Re: [OMPI users] Building MPI on Windows

 

Once you've run the installer, you'll have a set of OpenMPI debug and release 
dlls, libraries to link to and the necessary include files.  If you're 
installing the 64-bit version, it will end up here by default:

C:\Program Files (x86)\OpenMPI_v1.6-x64

Damien 

On 13/06/2012 1:35 PM, vimalmat...@eaton.com wrote: 

What do I do after I run it?

 

--

Vimal

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Ralph Castain
Sent: Wednesday, June 13, 2012 3:32 PM
To: Open MPI Users
Subject: Re: [OMPI users] Building MPI on Windows

 

I'm not a Windozer, so I can't speak to the port for that platform. However, 
the conversation here seems strange to me. Have you actually read the 
instructions on the open-mpi.org web site?

 

Looks pretty simple to me. You download the .exe installer for either 32 or 64 
bits, and run it. You don't build OMPI from source - the distro contains 
everything you need to just run.

 

See:

 

http://www.open-mpi.org/software/ompi/v1.6/

 

for the software and some Windows notes.

 

 

On Jun 13, 2012, at 1:20 PM, Trent Creekmore wrote:





I just gave up and stuck with Unix/Linux.  Eclipse IDE offers a very nice 
plugin for developing and debugging MPI code named Parallel Tools Platform. 
Something not available in Visual Studio, except for similar one made by Intel, 
but I believe you have to use their compiler.

 

You could always run Eclipse remotely from any Windows OS using a Secure Shell 
client and Xming (A Windows based X Server). That is what I do, and no more 
wasting time trying to get OMPI trying to run on Windows.

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:09 PM
To: us...@open-mpi.org; us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

I've tried the Cygwin way.
Been hitting roadblocks for a week now. I've just uninstalled everything and 
started from scratch again.

--
Vimal


-Original Message-----
From: users-boun...@open-mpi.org on behalf of Trent Creekmore
Sent: Wed 6/13/2012 2:47 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

This may, or may not be helpful, but I have tried the Windows offerings. I have 
never gotten anything to function was expected. Compiling, or the available 
binaries. I think they just don't work at all.



My suggestion which I feel would be easier, and less headache way would be to 
install something like CygWin, which would give you a Unix/Linux like 
environment running under Windows.

You would only need to compile it in CygWin just like the Linux/Unix docs say 
to do.



I don't know if anyone else has done it this way or not.





From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 1:32 PM
To: us...@open-mpi.org
Subject: [OMPI users] Building MPI on Windows



Hi,



I'm trying to follow the ReadMe file to build OpenMPI on Windows:



Step 1: Untar the contrib/platform/win32/ompi-static.tgz tarball in the root 
directory of the Open MPI distribution.

I do not have ompi-static.tgz in the mentioned path.



Step 2: Go in the ompi/datatype subdirectory in the Open MPI distribution and 
copy the following:  

datatype_pack.c   to datatype_pack_checksum.c

datatype_unpack.c to datatype_unpack_checksum.c

I do not see these files in the mentioned path.



Step 4: Open the Open MPI project (.sln file) from the root directory of the 
distribution.

I don't have a .sln file anywhere



Help anyone? Shiqing?



Thanks,

Vimal



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 11:21 AM
To: f...@hlrs.de
Cc: us...@open-mpi.org
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



I did make uninstall. I also deleted the folders of the other imp

Re: [OMPI users] Building MPI on Windows

[Trent Creekmore]

I meant the actual files, not including folders.

But you won’t need to Bin files, 

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 3:13 PM
To: us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

I put all the folders (bin, include, etc, lib and share) in the root folder of 
the project. No success.

Tried adding all the .h files in include in the Header files folder under the 
Project in VS. Still no go.

 

--Vimal 

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Trent Creekmore
Sent: Wednesday, June 13, 2012 3:52 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

 

I find the easiest way to know if LIB and DLL function correctly, and avoiding  
confusion on correct setup is it just drop them all in the root directory of 
your project. VS should see them upon load of that project.

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:47 PM
To: us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

Yes, and then I added the libraries folder in Visual Studio under Project 
Properties>Linker>General>Additional Library Directories.

I tried compiling simple ‘Hello World’’ code and I get an error message saying 
‘Cannot open : No such file or directory.

 

What step am I missing?

 

--

Vimal

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Damien
Sent: Wednesday, June 13, 2012 3:43 PM
To: Open MPI Users
Subject: Re: [OMPI users] Building MPI on Windows

 

Once you've run the installer, you'll have a set of OpenMPI debug and release 
dlls, libraries to link to and the necessary include files.  If you're 
installing the 64-bit version, it will end up here by default:

C:\Program Files (x86)\OpenMPI_v1.6-x64

Damien 

On 13/06/2012 1:35 PM, vimalmat...@eaton.com wrote: 

What do I do after I run it?

 

--

Vimal

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Ralph Castain
Sent: Wednesday, June 13, 2012 3:32 PM
To: Open MPI Users
Subject: Re: [OMPI users] Building MPI on Windows

 

I'm not a Windozer, so I can't speak to the port for that platform. However, 
the conversation here seems strange to me. Have you actually read the 
instructions on the open-mpi.org web site?

 

Looks pretty simple to me. You download the .exe installer for either 32 or 64 
bits, and run it. You don't build OMPI from source - the distro contains 
everything you need to just run.

 

See:

 

http://www.open-mpi.org/software/ompi/v1.6/

 

for the software and some Windows notes.

 

 

On Jun 13, 2012, at 1:20 PM, Trent Creekmore wrote:

 

I just gave up and stuck with Unix/Linux.  Eclipse IDE offers a very nice 
plugin for developing and debugging MPI code named Parallel Tools Platform. 
Something not available in Visual Studio, except for similar one made by Intel, 
but I believe you have to use their compiler.

 

You could always run Eclipse remotely from any Windows OS using a Secure Shell 
client and Xming (A Windows based X Server). That is what I do, and no more 
wasting time trying to get OMPI trying to run on Windows.

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:09 PM
To: us...@open-mpi.org; us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

I've tried the Cygwin way.
Been hitting roadblocks for a week now. I've just uninstalled everything and 
started from scratch again.

--
Vimal


-Original Message-
From: users-boun...@open-mpi.org on behalf of Trent Creekmore
Sent: Wed 6/13/2012 2:47 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

This may, or may not be helpful, but I have tried the Windows offerings. I have 
never gotten anything to function was expected. Compiling, or the available 
binaries. I think they just don't work at all.



My suggestion which I feel would be easier, and less headache way would be to 
install something like CygWin, which would give you a Unix/Linux like 
environment running under Windows.

You would only need to compile it in CygWin just like the Linux/Unix docs say 
to do.



I don't know if anyone else has done it this way or not.





From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 1:32 PM
To: us...@open-mpi.org
Subject: [OMPI users] Building MPI on Windows



Hi,



I'm trying to follow the ReadMe file to build OpenMPI on Windows:



Step 1: Untar the contrib/platform/win32/ompi-static.tgz tarball in the root 
directory of the Open MPI distribution.

I do not have ompi-static.tgz in the mentioned path.

Re: [OMPI users] Building MPI on Windows

[Trent Creekmore]

Well, you can now see why I gave up on trying to get to it function with 
Windows.

I would say work with Linux and using the guide I did, to at least get you 
started on doing some work instead of wasting a lot of time working on that. 

If you want it to function with Windows that badly just keep working on it in 
spare time. Meanwhile get to coding now using the method I told you. 

 

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 3:23 PM
To: us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

Yes, did that too.

 

--

Vimal

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Trent Creekmore
Sent: Wednesday, June 13, 2012 4:21 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

 

I meant the actual files, not including folders.

But you won’t need to Bin files, 

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 3:13 PM
To: us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

I put all the folders (bin, include, etc, lib and share) in the root folder of 
the project. No success.

Tried adding all the .h files in include in the Header files folder under the 
Project in VS. Still no go.

 

--Vimal 

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Trent Creekmore
Sent: Wednesday, June 13, 2012 3:52 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

 

I find the easiest way to know if LIB and DLL function correctly, and avoiding  
confusion on correct setup is it just drop them all in the root directory of 
your project. VS should see them upon load of that project.

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:47 PM
To: us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

Yes, and then I added the libraries folder in Visual Studio under Project 
Properties>Linker>General>Additional Library Directories.

I tried compiling simple ‘Hello World’’ code and I get an error message saying 
‘Cannot open : No such file or directory.

 

What step am I missing?

 

--

Vimal

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Damien
Sent: Wednesday, June 13, 2012 3:43 PM
To: Open MPI Users
Subject: Re: [OMPI users] Building MPI on Windows

 

Once you've run the installer, you'll have a set of OpenMPI debug and release 
dlls, libraries to link to and the necessary include files.  If you're 
installing the 64-bit version, it will end up here by default:

C:\Program Files (x86)\OpenMPI_v1.6-x64

Damien 

On 13/06/2012 1:35 PM, vimalmat...@eaton.com wrote: 

What do I do after I run it?

 

--

Vimal

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Ralph Castain
Sent: Wednesday, June 13, 2012 3:32 PM
To: Open MPI Users
Subject: Re: [OMPI users] Building MPI on Windows

 

I'm not a Windozer, so I can't speak to the port for that platform. However, 
the conversation here seems strange to me. Have you actually read the 
instructions on the open-mpi.org web site?

 

Looks pretty simple to me. You download the .exe installer for either 32 or 64 
bits, and run it. You don't build OMPI from source - the distro contains 
everything you need to just run.

 

See:

 

http://www.open-mpi.org/software/ompi/v1.6/

 

for the software and some Windows notes.

 

 

On Jun 13, 2012, at 1:20 PM, Trent Creekmore wrote:

 

I just gave up and stuck with Unix/Linux.  Eclipse IDE offers a very nice 
plugin for developing and debugging MPI code named Parallel Tools Platform. 
Something not available in Visual Studio, except for similar one made by Intel, 
but I believe you have to use their compiler.

 

You could always run Eclipse remotely from any Windows OS using a Secure Shell 
client and Xming (A Windows based X Server). That is what I do, and no more 
wasting time trying to get OMPI trying to run on Windows.

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:09 PM
To: us...@open-mpi.org; us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

I've tried the Cygwin way.
Been hitting roadblocks for a week now. I've just uninstalled everything and 
started from scratch again.

--
Vimal


-Original Message-
From: users-boun...@open-mpi.org on behalf of Trent Creekmore
Sent: Wed 6/13/2012 2:47 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

This may, or may not be helpful, but I have tried the Windows offerings. I have 
never gotten anything to function was expected. Compiling, or the availabl

Re: [OMPI users] Building MPI on Windows

[Trent Creekmore]

eader files, libraries and binaries into a set of directories, under whatever 
directory you said your source is in with CMake.  On mine it was 
C:\projects6\openmpi-1.6\installed.  In there you'll see bin, include, lib and 
share directories.  That's a complete OpenMPI build with everything you need.

If you'd like to try this and provide feedback, we can tweak the instructions 
until they're bulletproof.  I can help you build with whatever compilers you 
have on your system, just post back to the list.  I don't do Cygwin though.  
Doing HPC on Windows is weird enough.  :-)

Damien

On 13/06/2012 1:35 PM, vimalmat...@eaton.com wrote: 

What do I do after I run it?

 

--

Vimal

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of Ralph Castain
Sent: Wednesday, June 13, 2012 3:32 PM
To: Open MPI Users
Subject: Re: [OMPI users] Building MPI on Windows

 

I'm not a Windozer, so I can't speak to the port for that platform. However, 
the conversation here seems strange to me. Have you actually read the 
instructions on the open-mpi.org web site?

 

Looks pretty simple to me. You download the .exe installer for either 32 or 64 
bits, and run it. You don't build OMPI from source - the distro contains 
everything you need to just run.

 

See:

 

http://www.open-mpi.org/software/ompi/v1.6/

 

for the software and some Windows notes.

 

 

On Jun 13, 2012, at 1:20 PM, Trent Creekmore wrote:









I just gave up and stuck with Unix/Linux.  Eclipse IDE offers a very nice 
plugin for developing and debugging MPI code named Parallel Tools Platform. 
Something not available in Visual Studio, except for similar one made by Intel, 
but I believe you have to use their compiler.

 

You could always run Eclipse remotely from any Windows OS using a Secure Shell 
client and Xming (A Windows based X Server). That is what I do, and no more 
wasting time trying to get OMPI trying to run on Windows.

 

From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 2:09 PM
To: us...@open-mpi.org; us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows

 

I've tried the Cygwin way.
Been hitting roadblocks for a week now. I've just uninstalled everything and 
started from scratch again.

--
Vimal


-Original Message-
From: users-boun...@open-mpi.org on behalf of Trent Creekmore
Sent: Wed 6/13/2012 2:47 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

This may, or may not be helpful, but I have tried the Windows offerings. I have 
never gotten anything to function was expected. Compiling, or the available 
binaries. I think they just don't work at all.



My suggestion which I feel would be easier, and less headache way would be to 
install something like CygWin, which would give you a Unix/Linux like 
environment running under Windows.

You would only need to compile it in CygWin just like the Linux/Unix docs say 
to do.



I don't know if anyone else has done it this way or not.





From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 1:32 PM
To: us...@open-mpi.org
Subject: [OMPI users] Building MPI on Windows



Hi,



I'm trying to follow the ReadMe file to build OpenMPI on Windows:



Step 1: Untar the contrib/platform/win32/ompi-static.tgz tarball in the root 
directory of the Open MPI distribution.

I do not have ompi-static.tgz in the mentioned path.



Step 2: Go in the ompi/datatype subdirectory in the Open MPI distribution and 
copy the following:  

datatype_pack.c   to datatype_pack_checksum.c

datatype_unpack.c to datatype_unpack_checksum.c

I do not see these files in the mentioned path.



Step 4: Open the Open MPI project (.sln file) from the root directory of the 
distribution.

I don't have a .sln file anywhere



Help anyone? Shiqing?



Thanks,

Vimal



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf 
Of vimalmat...@eaton.com
Sent: Wednesday, June 13, 2012 11:21 AM
To: f...@hlrs.de
Cc: us...@open-mpi.org
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



I did make uninstall. I also deleted the folders of the other implementation.

I ran ./configure and make all install.

At the end of the make I saw a bunch of errors for the makefiles. I've attached 
the .log and .out files.



Please tell me if I'm on the right track.



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 9:37 AM
To: Mathew, Vimal
Cc: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

I'm not sure how you can uninstall  the other one, may be 'make uninstall' from 
the source? Or you may also ask in their mailing list.

Another solution might us

Re: [OMPI users] Segmentation fault with plenty of RAM

[Trent Creekmore]

Christopher,

Segmentation faults has nothing to do with amount of memory you have in your
system.
Rather is has to do with memory access. A segmentation fault occurs as a
result of the program trying to access outside the bounds of memory
locations that have been set aside for storage at compile time.

These are usually caused by programmer error in the code. libSystem.B.dylib
could possibly have a bug in it, in which the developers of it either know
and about and have fixed it, in the process of fixing it, or need to know
about it. You may want to try to get the latest version of it before you
look further. Though I am new to OpenMPI myself and really have not had a
chance to really dig into it yet, the problem could be elsewhere besides in
libSystem.B.dylib.

But hopefully someone else here has had similar experience and knows exactly
what to do. 

If you had a shortage of memory, the OS would start doing more and page
swaps on the "swap drive" and you would notice this by the system getting
painfully slow.


Trent




-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Christopher O'Brien
Sent: Tuesday, February 16, 2010 8:33 AM
To: us...@open-mpi.org
Subject: [OMPI users] Segmentation fault with plenty of RAM

To all,
I am trying to start work with Quantum Espresso (www.quantum_espresso.org)
on my MacBook Pro (running 10.6.2 with 64-bit kernel extensions enabled)
using 2GB of ram and an Intel Core2 Duo. Keep in mind that I am not really
an expert and I have a very bad track record in compiling applications.

I received no errors when compiling the latest versions of FFTW, openmpi,
and lapack (which were found by QE's configure program). I ran the basic
Openmpi tests included with the distribution, and found no problems. I have
modified my path to use the MPI compiler wrappers that I compiled, as Mac's
built in openmpi does not have F90/F77 support.

Someone reported a similar problem to the error reported below on this forum
(http://www.open-mpi.org/community/lists/users/2008/08/6348.php) but it may
or not be relevant. The problem does not seem to be in one executable of the
package ('bands.x') exclusively, but libSystem.B.dylib always seems to be in
the middle of things.  However, I tracked the memory usage but the example
never used more than 40MB.

The error message resulting from "example01" follows:
running the symmetry analysis for Si bands...[schrodingersdog:00322] ***
Process received signal ***
[schrodingersdog:00322] Signal: Segmentation fault (11)
[schrodingersdog:00322] Signal code: Address not mapped (1)
[schrodingersdog:00322] Failing at address: 0x698d3230
[schrodingersdog:00322] [ 0] 2   libSystem.B.dylib
0x7fff87248eaa _sigtramp + 26
[schrodingersdog:00322] [ 1] 3   ???
0x0001013fc080 0x0 + 4315922560
[schrodingersdog:00322] [ 2] 4   bands.x
0x00010003d3ed sym_band_ + 7597
[schrodingersdog:00322] [ 3] 5   bands.x
0x000114f5 MAIN__ + 1317
[schrodingersdog:00322] [ 4] 6   bands.x
0x00011a01 main + 33
[schrodingersdog:00322] [ 5] 7   bands.x
0x00010fa4 start + 52
[schrodingersdog:00322] [ 6] 8   ???
0x0001 0x0 + 1
[schrodingersdog:00322] *** End of error message ***
./run_example: line 77:   322 Segmentation fault  $BANDS_COMMAND <
si.bands.in > si.bands.out
done
cleaning /Users/ChrisOBrien/tmp... done

Thanks in advance,
Chris

===
Christopher J. O'Brien
cjobr...@ncsu.edu
http://www4.ncsu.edu/~cjobrien/index.html
See what I'm citing at http://www.citeulike.org/cjo123

Graduate Research Assistant
Computational Materials Group
Department of Materials Science & Engineering
North Carolina State University
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Re: [OMPI users] openMPI (multiple CPUs)

[Trent Creekmore]

Sure, go buy a motherboard that you can plug in 2 or more CPUs into it.

Otherwise it would be cheaper to buy another box.



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Rodolfo Chua
Sent: Friday, February 26, 2010 8:14 PM
To: Open MPI Users
Subject: [OMPI users] openMPI (multiple CPUs)



Hi all! 

I'm running a code using openMPI in a quad-core cpu. Though it is working, a
quad-core is still not enough. 
Is there another way, aside from a server, of connecting 2 or 3 CPUs and
running them on parallel with MPI?

Thanks.
Rodolfo

Re: [OMPI users] Non-root install; hang there running on multiple nodes

[Trent Creekmore]

You may also want to check with the admin. I know on the system I use, he
will prevent you from using many nodes until you demonstrate you know what
you are doing. 


-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Jeff Squyres
Sent: Wednesday, March 24, 2010 3:33 PM
To: Open MPI Users
Subject: Re: [OMPI users] Non-root install; hang there running on multiple
nodes

Can you mpirun non-MPI applications, like "hostname"?  I frequently run this
as a first step to debugging a wonky install.  For example:

shell$ hostname
barney
shell$ mpirun hostname
barney
shell$ cat hosts
barney
rubble
shell$ mpirun --hostfile hosts hostname
barney
rubble
shell$


On Mar 24, 2010, at 4:28 PM, haoanyi wrote:

> Hi, 
> 
> I installed OpenMPI1.4.1 as a non-root user on a cluster. It is totally OK
when I run with mpirun or mpiexec on one single node for many processes.
However, when I lauch many processes on multiple nodes, I can observe jobs
are distributed to those nodes (by using "top"), but all the jobs just hang
there and cannot finish.
> 
> I think the nodes use TCP to communicate with each other. This cluster
also provides MPICH2, which was configured by the sys admin., and has no
problem to do node communication in MPICH2. Besides, I read from some posts,
which says this may be caused by TCP firewall. Since I have no root's right,
and I don't know what shall request the admin. to do to fix this problem.
So, can you tell me how to do that either by the admin root or by the
non-root user (if possible)?
> 
> Thank you very much.
> Hao
> 
> 
> ___
> users mailing list
> us...@open-mpi.org
> http://www.open-mpi.org/mailman/listinfo.cgi/users


-- 
Jeff Squyres
jsquy...@cisco.com
For corporate legal information go to:
http://www.cisco.com/web/about/doing_business/legal/cri/


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Re: [OMPI users] Help om Openmpi

[Trent Creekmore]

SSH means SECURE Shell. That being said, it would not be very secure without
a password, now would it?



Besides it is the user account that requires passwords, not SHH.





From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Huynh Thuc Cuoc
Sent: Monday, April 05, 2010 9:19 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help om Openmpi



Dear friends,
I am try to follo the advices about to do login to remote by ssh without
password, for example:
This is one of ...:
SSH without password

Using the below steps, you can ssh to the server from client without the
entering any password.
The machine which run the ssh command is the client
The machine that the client access using ssh is the server

   1. Run the following command on the client
  * -> ssh-keygen -t dsa
   2. File id_dsa and id_dsa.pub will be created inside $HOME/.ssh
   3. Copy id_dsa.pub to the server's .ssh directory
  * -> scp $HOME/.ssh/id_dsa.pub user@server:/home/user/.ssh
   4. Change to /root/.ssh and create file authorized_keys containing id_dsa
content
  * -> cd /home/user/.ssh
  * -> cat id_dsa >> authorized_keys
   5. You can try ssh to the server from the client and no password will be
needed
  * -> ssh user@server

BUT, when I test login to remote host, alway passwd request.
How ang what I have to do. I runs all (headnode and nodes ) with ConOS 5.4.
Have anyone IDEALS !
HT Cuoc



On Wed, Mar 31, 2010 at 5:43 PM, Jeff Squyres (jsquyres)
 wrote:

Yes, you need to install open mpi on all nodes and you need to be able to
login to each node without being prompted for a password. 

Also, not that v1.2.7 is pretty ancient. If you're juist starting with open
mpi, can you upgrade to the latest version? 

-jms 
Sent from my PDA. No type good.



  _  

From: users-boun...@open-mpi.org  
To: us...@open-mpi.org  
Sent: Wed Mar 31 03:39:08 2010
Subject: [OMPI users] Help om Openmpi 

Dear all,
I had install my cluster which the configuration as following:
- headnode : 
  + linux CenOS 5.4, 4 CPUs, 3G RAM
  + sun gridengine sge6.0u12. The headnode is admin and submit node too.
  + Openmpi 1.2.9. In the installation openmpi :.configure
--prefix=/opt/openmpi --with-sge ...Processes complilation and make was
fine.
  + I have 2 others nodes which confg. are: 4 CPU, 1 G RAM and on which run
sgeexecd.
Testing for SGE on headnode and nodes by qsub was fine.
When testing openmpi with as folowing:
[guser1@ioitg2 examples]$ /opt/openmpi/bin/mpirun -np 4 --hostfile myhosts
hello_cxx
Hello, world!  I am 0 of 4
Hello, world!  I am 1 of 4
Hello, world!  I am 3 of 4
Hello, world!  I am 2 of 4
[guser1@ioitg2 examples]$ 

The openmpi runs well.
My file myhosts:
ioitg2.ioit-grid.ac.vn slots=4
node1.ioit-grid.ac.vn slots=4
node2.ioit-grid.ac.vn slots=4

Now for more processes:
[guser1@ioitg2 examples]$ /opt/openmpi/bin/mpirun -np 6 --hostfile myhosts
hello_cxx
gus...@node1.ioit-grid.ac.vn's password: 
--
Failed to find the following executable:

Host:   node1.ioit-grid.ac.vn
Executable: hello_cxx

Cannot continue.
--
mpirun noticed that job rank 0 with PID 19164 on node ioitg2.ioit-grid.ac.vn
exited on signal 15 (Terminated). 
3 additional processes aborted (not shown)
[guser1@ioitg2 examples]$ 

This is error massage. I was login on node1 successful.

PLS, Help me. What problems I have 9installation, configurations, ...). Have
I install openmpi on all nodes ?

Thank you very much and I am waitting your helps.





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Re: [OMPI users] Help om Openmpi

[Trent Creekmore]

I have and the 1024 RSA has already been cracked.



-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Terry Frankcombe
Sent: Tuesday, April 06, 2010 2:44 AM
To: Open MPI Users
Subject: Re: [OMPI users] Help om Openmpi

On Tue, 2010-04-06 at 02:33 -0500, Trent Creekmore wrote:
> SSH means SECURE Shell. That being said, it would not be very secure
> without a password, now would it?

I think you need to read about public key authentication.  It is secure.


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Re: [OMPI users] How to debug Open MPI programs with gdb

[Trent Creekmore]

You can run a X-windows server on your local machine and use the GUI for
gdb, or use Eclipse Parallel Tools Platform (http://www.eclipse.org/ptp/)
that has a debugger and turn on X-Forwarding in your Secure Shell client.



-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of ??  (Nemanja Ilic)
Sent: Thursday, April 22, 2010 6:12 AM
To: Open MPI User List
Subject: [OMPI users] How to debug Open MPI programs with gdb

Hello,

I tried to debug with command: "mpirun -debugger gdb -debug -np 4
my_program"
Surely,  it starts the debugger, but it doesn't start the debugging nor it
loads any of the my_program threads into the debugger. If I start debugging
manually ("file my_program", then "run"), I can start only one thread of
my_program.
On the contrary when I debug with "mpirun -np 4 xterm -e gdb
my_mpi_application" the four debugger windows are started with separate
thread each, just as it should be.
Since I will be using debugger on a remote computer I can only run gdb in
console mode. Can anyone help me with this?

Thank you in advance,
Best regards,
Nemanja Ilic
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Re: [OMPI users] How to "guess" the incoming data type ?

[Trent Creekmore]

I don't think there is a way to guess, that is why most languages use a
naming type (i.e.: int, float, etc) to explicitly tell what the type is. If
this app is letting them enter whatever they want and without knowing more
about this application, then I could assume it is giving them the type of
string as languages such as Visual Basic, Visual C++ and C# do in the GUI.



-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Sylvestre Ledru
Sent: Sunday, April 25, 2010 8:46 AM
To: us...@open-mpi.org
Subject: [OMPI users] How to "guess" the incoming data type ?

Hello,


I am currently extending an application with MPI capabilities. 
This high-level application allows users to use dynamic types. Therefor,
on the slaves, I have no way to know what the master will send me.

Therefor, in the slave side, I need to "guess" what I am receiving.

For example, I am using contiguous data on the master defined this way:

MPI_Datatype matrixOfDouble;
MPI_Type_contiguous(size, MPI_DOUBLE, &matrixOfDouble);
MPI_Type_commit(&matrixOfDouble);

sent this way:
double A[] = {1,3,3,2,3,4};
MPI_Send(&A, 1, matrixOfDouble, i, TAG, MPI_COMM_WORLD);


On the slave, in my example, since I know I am going to receive a
matrixOfDouble, I can do the following:
MPI_Probe( MPI_ANY_SOURCE, TAG, MPI_COMM_WORLD, &stat );
MPI_Get_elements( &stat, matrixOfDouble, &count);
double BRecv[count];
MPI_Recv(BRecv, BUFSIZE, matrixOfDouble, i, TAG, MPI_COMM_WORLD, &stat)

I would like to know if (and how) it is possible on the slave side to
know that the received type is matrixOfDouble ?

If it is not possible, is there any other way in MPI ?
(I would like to avoid a extra master=> slave message to send the type).

Thanks
Sylvestre


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Re: [OMPI users] deadlock when calling MPI_gatherv

[Trent Creekmore]

You are going to have to debug and trace the program to find out where it is
stopping.
You may want to try using KDbg, a graphical front end for the command line
debugger dbg, which makes it a LOT easier, or use Eclipse.




-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Teng Lin
Sent: Monday, April 26, 2010 6:49 PM
To: Open MPI Users
Subject: [OMPI users] deadlock when calling MPI_gatherv

Hi,

We recently ran into deadlock when calling MPI_gatherv with Open MPI 1.3.4.
It seems to have something to do with sm at first. However, it still hangs
even after turning off sm btl.

Any idea how to track down the problem?

Thanks,
Teng

#
Stack trace for master node
#
mca_btl_sm_component_progress
opal_progress
opal_condition_wait
ompi_request_default_wait_all
ompi_coll_tuned_sendrecv_actual
ompi_coll_tuned_barrier_intra_two_procs
ompi_coll_tuned_barrier_intra_dec_fixed
mca_coll_sync_gatherv
PMPI_Gatherv


#
Stack trace for slave node
#
mca_btl_sm_component_progress
opal_progress
opal_condition_wait
ompi_request_wait_completion
mca_pml_ob1_recv
mca_coll_basic_gatherv_intra
mca_coll_sync_gatherv


#
Message queue from totalview

MPI_COMM_WORLD
Comm_size2
Comm_rank0
Pending receives: none
Unexpected messages : no information available
Pending sends   : none

MPI_COMM_SELF
Comm_size1
Comm_rank0
Pending receives: none
Unexpected messages : no information available
Pending sends   : none

MPI_COMM_NULL
Comm_size0
Comm_rank   -2
Pending receives: none
Unexpected messages : no information available
Pending sends   : none

MPI COMMUNICATOR 3 DUP FROM 0
Comm_size2
Comm_rank0
Pending receives: none
Unexpected messages : no information available
Pending sends   : none

MPI COMMUNICATOR 4 SPLIT FROM 3
Comm_size2
Comm_rank0
Pending receives: none
Unexpected messages : no information available
Pending sends   : none

MPI COMMUNICATOR 5 SPLIT FROM 4
Comm_size2
Comm_rank0
Pending receives: none
Unexpected messages : no information available
Pending sends   : none

MPI COMMUNICATOR 6 SPLIT FROM 4
Comm_size1
Comm_rank0
Pending receives: none
Unexpected messages : no information available
Pending sends   : none

MPI COMMUNICATOR 7 DUP FROM 4
Comm_size2
Comm_rank0
Pending receives   
[0]
   Receive: 0x80b9000
   Data: 1 * MPI_CHAR
   Status   Pending
   Source   0 (orterun.0)
   Tag  7 (0x0007)
   User Buffer  0xb06fa010 -> 0x (0)
   Buffer Length1359312 (0x0014bdd0)
[1]
   Receive: 0x80b9200
   Data: 1 * MPI_CHAR
   Status   Pending
   Source   0 (orterun.0)
   Tag  5 (0x0005)
   User Buffer  0xb0c2a010 -> 0x (0)
   Buffer Length1359312 (0x0014bdd0)
[2]
   Receive: 0x80b9400
   Data: 1 * MPI_CHAR
   Status   Pending
   Source   1 (orterun.1)
   Tag  3 (0x0003)
   User Buffer  0xb115a010 -> 0xc0ef9e79 (-1058038151)
   Buffer Length1359312 (0x0014bdd0)
[3]
   Receive: 0x80b9600
   Data: 1 * MPI_CHAR
   Status   Pending
   Source   1 (orterun.1)
   Tag  1 (0x0001)
   User Buffer  0xb168a010 -> 0xc0c662aa (-1060740438)
   Buffer Length1359312 (0x0014bdd0)
[4]
   Receive: 0x82a2500
   Data: 1 * MPI_CHAR
   Status   Pending
   Source   0 (orterun.0)
   Tag  11 (0x000b)
   User Buffer  0xafc9a010 -> 0x (0)
   Buffer Length1359312 (0x0014bdd0)
[5]
   Receive: 0x82a2700
   Data: 1 * MPI_CHAR
   Status   Pending
   Source   0 (orterun.0)
   Tag  9 (0x0009)
   User Buffer  0xb01ca010 -> 0x (0)
   Buffer Length1359312 (0x0014bdd0)

Unexpected messages : no information available Pending sends [0]
   Send: 0x80b8500
   Data transfer completed
   Status   Complete
   Target   0 (orterun.0)
   Tag  4 (0x0004)
   Buffer   0xb0846010 -> 0x40544279 (1079263865)
   Buffer Length2548 (0x09f4)
[1]
   Send: 0x80b8780
   Data transfer completed
   Status   Complete
   Target   0 (orterun.0)
   Tag  6 (0x0006)
   Buffer   0xb0d76010 -> 0x41a756bf (1101485759)
   Buffer Length2992 (0x0bb0)
[2]
   Send: 0x80b8a00
   Data transfer completed
   Status   Complete
   Target   1 (orterun.1)
   Tag  0 (0x)
   Buffer

Re: [OMPI users] Calling MPI from a CGI script

[Trent Creekmore]

Have you tried running a copy in the cgi-bin directory?
That directory is setup to place programs in when needing to pass
information to-fro the web server and clients.


-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Srujan Enaganti
Sent: Thursday, April 29, 2010 2:26 PM
To: us...@open-mpi.org
Subject: [OMPI users] Calling MPI from a CGI script

Hi,

I am trying to run an MPI program as a CGI Python script which is running 
over an Apache web server running locally on my computer.

I have a test.py file which has the code snippet

cmd = 'opt/local/bin/mpiexec -np 10 testmpi'
output = commands.getoutput(cmd)


When I run the file test.py as an executable over command line (as 
./test.py ), it works perfectly fine.

But when I try to run the same over the web browser, the MPI code 
functions as if the command was 'mpiexec -n 1 testmpi'.
It is unable to recognize that there are multiple processes that are being 
invoked. In other words it is not forking child processes.

I checked in to the error log in apache regarding the same. The 
corresponding error code is following:

[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261.local:07199] 
[0,0,0]-[0,0,1] mca_oob_tcp_msg_send_handler: writev failed: Broken pipe 
(32), referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261.local:07199] 
[0,0,0] ORTE_ERROR_LOG: Communication failure in file 
/SourceCache/openmpi/openmpi-
5/openmpi/orte/mca/gpr/replica/communications/gpr_replica_recv_proxy_msgs.c 
at line 49, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] *** 
Process received signal ***, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] 
Signal: Segmentation fault (11), referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] Signal 
code: Address not mapped (1), referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] 
Failing at address: 0x8, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 0] 2 
libSystem.B.dylib   0x803ec3fa _sigtramp + 26, 
referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 1] 3 
??? 0x0004 0x0 + 4, referer: 
http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 2] 4 
libopen-rte.0.dylib 0x0002dca9 
mca_oob_send_packed_nb + 297, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 3] 5 
mca_oob_tcp.so  0x000f4a8f 
mca_oob_tcp_msg_complete + 175, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 4] 6 
mca_oob_tcp.so  0x000f588a 
mca_oob_tcp_peer_send + 298, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 5] 7 
mca_oob_tcp.so  0x000f9973 mca_oob_tcp_send_nb 
+ 595, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 6] 8 
libopen-rte.0.dylib 0x0002dc4c 
mca_oob_send_packed_nb + 204, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 7] 9 
mca_gpr_replica.so  0x002271a0 
orte_gpr_replica_recv + 304, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 8] 
10  libopen-rte.0.dylib 0x0002da13 
mca_oob_recv_packed_nb + 403, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [ 9] 
11  mca_oob_tcp.so  0x000f5073 
mca_oob_tcp_msg_recv_complete + 771, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [10] 
12  mca_oob_tcp.so  0x000f6400 
mca_oob_tcp_peer_lookup + 2240, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [11] 
13  libopen-pal.0.dylib 0x00077f3e 
opal_event_base_loop + 990, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [12] 
14  libopen-pal.0.dylib 0x0006e8ce opal_progress + 
126, referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [13] 
15  mpiexec 0x1b9d orterun + 2242, 
referer: http://localhost:/
[Wed Apr 28 20:32:20 2010] [error] [client ::1] [NeoDen-1261:07199] [14] 
16  mpiexec 0x1764 orterun + 1161, 
referer: http://localhos

Re: [OMPI users] Fortran support on Windows Open-MPI

[Trent Creekmore]

Compaq Visual Fortan for Windows was out, but HP aquired Compaq. HP, later
deciding they did not want it, along with the Alpha processor techonology,
sold them to Intel. So now it's Intel Visual Fortran Compiler for Windows.
In addition, if you don't want that package, instead they do sell a plug-in
for Microsoft Visual Studio. There is also a HPC/Parallel enviroment too for
Visual Studio, but none of these are cheap.

I don't see why you can't include Open MPI libraries in that enviroment.

Trent


-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Damien
Sent: Thursday, May 06, 2010 10:53 PM
To: us...@open-mpi.org
Subject: [OMPI users] Fortran support on Windows Open-MPI

Hi all,

Can anyone tell me what the plans are for Fortran 90 support on Windows, 
with say the Intel compilers?  I need to get MUMPS built and running 
using Open-MPI, with Visual Studio and Intel 11.1.  I know Fortran isn't 
part of the regular CMake build for Windows.  If someone's working on 
this I'm happy to test or help out.

Damien
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Re: [OMPI users] Install OpenMPI on Win 7 machine

[Trent Creekmore]

I would say trying put Cygwin on the computer.



http://www.cygwin.com/



It puts a Linux like environment on Windows which includes  gcc and g++.



Since you are setting up virtual clusters, why not just go ahead and setup a
virtual Linux cluster and be on to other things than trying to get it
compile on Windows?



In many distros, Open MPI is already included in their standard repository
so you would not even need to compile it.













From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Alexandru Blidaru
Sent: Monday, July 12, 2010 12:35 PM
To: f...@hlrs.de
Cc: Open MPI Users
Subject: Re: [OMPI users] Install OpenMPI on Win 7 machine



Hey,



I installed a 90 day trial of Visual Studio 2008, and I am pretty sure I am
getting the exact same thing. The log and the picture are attached just as
last time. Any new ideas?



Regards,

Alex

On Mon, Jul 12, 2010 at 9:58 AM, Shiqing Fan  wrote:


Hi Alex,

When the attachment is large, you can set the email directly to me off the
list.

For the problem you got, the reason is that you are using MinGW, but not
Microsoft C/C++ compiler. Is that possible for you to just switch to
Microsoft Visual Studio 2005 or 2008? There are still many problems for
supporting MinGW at moment.


Regards,
Shiqing



On 2010-7-12 3:48 PM, Alexandru Blidaru wrote: 

Hi, 



I am attaching all the output text resulted when configuring for the first
time. I am also attaching a picture of the of the main area. My main purpose
of installing OpenMPI is to set up a set of "virtual cluster" on the Windows
7 machine, so I could get accustomed with the different settings, and so I
could try some small programs, before being allowed to work on the actual
cluster.



Note, this is the first time I am using a mailing list, so if I am not
allowed attachments, please tell me. I tried to keep them as small as
possible.



Thanks for your help,

Alex

On Sat, Jul 10, 2010 at 7:16 AM, Shiqing Fan  wrote:

Hi Alex,

Building Open MPI using CMake is the recommended procedure, you probably
should stick with it, and it has been proved working well on different
Windows platforms. The other building procedures are not well supported for
some time now, and they are deprecated.

For the problems that you got when building with CMake, it might because
some dependent headers/libraries are not installed. Could you please provide
the detail CMake error output, so that I can help you fix it?


Regards,
Shiqing 




On 2010-7-9 8:19 PM, Alexandru Blidaru wrote: 

Hey guys, 



This is my first time posting on an email list, so if I don't follow certain
protocols just tell me. Anyway, I am working at a research lab as a High
School Summer Intern, and part of my project involves installing OpenMPI on
a Windows machine to run some applications in virtual clusters. I tried
following the first two methods from the Windows ReadMe file, but none of
them work. For the first one, there are a bunch of header files cMake can't
find. For the second one, the cannot find the ompi-static.tgz tarball. The
set of files that I downloaded from OpenMPI can be found here (tried both
tars): http://www.open-mpi.org/software/ompi/v1.4/ .



I noticed however that the ompi-static tarball can be found in the
Subversion that i obtained this
way:http://www.open-mpi.org/svn/mercurial.php . Can anyone tell me what I
might be doing wrong? Or maybe more detailed steps? it's the first time I
work with OpenMPI or any similar technologies.



Thanks for your help,

Alex Blidaru


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users






-- 
--
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart








-- 
--
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Install OpenMPI on Win 7 machine

[Trent Creekmore]

Then do it on a USB drive.





https://fedorahosted.org/liveusb-creator/







From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Alexandru Blidaru
Sent: Monday, July 12, 2010 2:20 PM
To: Open MPI Users
Subject: Re: [OMPI users] Install OpenMPI on Win 7 machine



Well, I tried cygwin, and it aborted the whole thing at one point. I know
that most Linux distros come with OpenMPI. The cluster I'm actually going to
be working with has Linux on it. The reason why I am not switching to Linux
for the virtual cluster part is that my computer doesn't have a DVD/CD drive
and they told me that they don't really have time to set up Linux for me
through a network installation.

So for the next few days I will be stuck with Windows 7

On Mon, Jul 12, 2010 at 2:49 PM, Trent Creekmore
 wrote:

I would say trying put Cygwin on the computer.



http://www.cygwin.com/



It puts a Linux like environment on Windows which includes  gcc and g++.



Since you are setting up virtual clusters, why not just go ahead and setup a
virtual Linux cluster and be on to other things than trying to get it
compile on Windows?



In many distros, Open MPI is already included in their standard repository
so you would not even need to compile it.













From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Alexandru Blidaru
Sent: Monday, July 12, 2010 12:35 PM
To: f...@hlrs.de
Cc: Open MPI Users
Subject: Re: [OMPI users] Install OpenMPI on Win 7 machine



Hey,



I installed a 90 day trial of Visual Studio 2008, and I am pretty sure I am
getting the exact same thing. The log and the picture are attached just as
last time. Any new ideas?



Regards,

Alex

On Mon, Jul 12, 2010 at 9:58 AM, Shiqing Fan  wrote:


Hi Alex,

When the attachment is large, you can set the email directly to me off the
list.

For the problem you got, the reason is that you are using MinGW, but not
Microsoft C/C++ compiler. Is that possible for you to just switch to
Microsoft Visual Studio 2005 or 2008? There are still many problems for
supporting MinGW at moment.


Regards,
Shiqing



On 2010-7-12 3:48 PM, Alexandru Blidaru wrote: 

Hi, 



I am attaching all the output text resulted when configuring for the first
time. I am also attaching a picture of the of the main area. My main purpose
of installing OpenMPI is to set up a set of "virtual cluster" on the Windows
7 machine, so I could get accustomed with the different settings, and so I
could try some small programs, before being allowed to work on the actual
cluster.



Note, this is the first time I am using a mailing list, so if I am not
allowed attachments, please tell me. I tried to keep them as small as
possible.



Thanks for your help,

Alex

On Sat, Jul 10, 2010 at 7:16 AM, Shiqing Fan  wrote:

Hi Alex,

Building Open MPI using CMake is the recommended procedure, you probably
should stick with it, and it has been proved working well on different
Windows platforms. The other building procedures are not well supported for
some time now, and they are deprecated.

For the problems that you got when building with CMake, it might because
some dependent headers/libraries are not installed. Could you please provide
the detail CMake error output, so that I can help you fix it?


Regards,
Shiqing 




On 2010-7-9 8:19 PM, Alexandru Blidaru wrote: 

Hey guys, 



This is my first time posting on an email list, so if I don't follow certain
protocols just tell me. Anyway, I am working at a research lab as a High
School Summer Intern, and part of my project involves installing OpenMPI on
a Windows machine to run some applications in virtual clusters. I tried
following the first two methods from the Windows ReadMe file, but none of
them work. For the first one, there are a bunch of header files cMake can't
find. For the second one, the cannot find the ompi-static.tgz tarball. The
set of files that I downloaded from OpenMPI can be found here (tried both
tars): http://www.open-mpi.org/software/ompi/v1.4/ .



I noticed however that the ompi-static tarball can be found in the
Subversion that i obtained this
way:http://www.open-mpi.org/svn/mercurial.php . Can anyone tell me what I
might be doing wrong? Or maybe more detailed steps? it's the first time I
work with OpenMPI or any similar technologies.



Thanks for your help,

Alex Blidaru


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users





-- 
--
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart







-- 
--
Shiqing Fan  http:/