[OMPI users] mpirun: symbol lookup error: mpirun: undefined symbol: orte_xml_fp

2010-05-23 Thread Dawid Laszuk
Hi all,

It's a bit awkward for me to ask, because I'm not only newbie in
parallel programming but also in Linux system, but i've but searching
for long enough to loose any hopes.


My problem is, when I try to run compiled code with "mpirun" I get output:
mpirun: symbol lookup error: mpirun: undefined symbol: orte_xml_fp

I can compile code with "mpicc" (i write in C) and it runs, but only
on one CPU ( I have Athlon X2 64bit, dual core ). There is no
difference when I write "mpirun", "mpiexec" or "orterun" (but that's
normal, isn't it?). It doesn't matter what I'm trying to run; I get
that output just by typing it into console.

As I said, I know basics with linux and even adding some libs into sys
path is something which I still don't know ( and don't how much time
to read about).

I've attached things which maybe helpful ( output from "./configure",
"make all", "make install" ).
I'm using Linux Mint 8 ( Kernel Linux 2.6.31-20-generic). Have two CPU
cores AMD Athlon Dual-Core QL-60.

Much appreciate any help :)

Cheers,
David Laszuk


ompi-output.tar.bz2
Description: BZip2 compressed data


[OMPI users] Building 1.4.x on mac snow leopard with intel compilers

2010-05-23 Thread Glass, Micheal W
I'm having problems building a working version of openmpi 1.4.1/2 on a new 
Apple Mac Pro (dual quad-core nehalem processors) running snow leopard (10.6.3) 
with the Intel 11.1 compilers. I've tried the Intel 11.1.084 and 11.1.088 
versions of the compilers.  Everything appears to build just fine and some mpi 
test programs run but whenever I run a program with an MPI_Reduce() or 
MPI_Allreduce() I get a segfault (even with np=1).  I'm building openmpi with:

configure -without-xgrid -prefix= CC=icc CXX=icpc F77=ifort 
FC=ifort

When I build openmpi 1.4.1/2 with the GNU 4.3 compilers (installed via 
macports) using:

configure -without-xgrid -prefix= CC=gcc-mp-4.3 CXX=g++-mp-4.3 
F77=gfortran-mp-4.3 FC=gfortran-mp-4.3

all my mpi tests (6000+) run fine.  Any help would be appreciated.

Thanks,
Mike


Re: [OMPI users] General question on the implementation ofa"scheduler" on client side...

2010-05-23 Thread Olivier Riff
2010/5/21 Jeff Squyres 

> On May 21, 2010, at 3:13 AM, Olivier Riff wrote:
>
> > -> That is what I was thinking about to implement. As you mentioned, and
> specifically for my case where I mainly send short messages, there might not
> be much win. By the way, are their some benchmarks testing sequential
> MPI_ISend versus MPI_BCAST for instance ? The aim is to determine up which
> buffer size a MPI_BCast is worth to be used for my case. You can answer that
> the test is easy to do and that I can test it by myself :)
>
> "It depends".  :-)
>
> You're probably best writing a benchmark yourself that mirrors what your
> application is going to do.
>


OK, you're right I'll do it. Thanks again for your support.


Regards,

Olivier



>
> --
> Jeff Squyres
> jsquy...@cisco.com
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Re: [OMPI users] Building 1.4.x on mac snow leopard with intel compilers

2010-05-23 Thread Doug Reeder

Mike,

Are you sure that you are getting the openmpi that you built and not  
the one supplied w/ OS X. I use modules to make sure that I am getting  
the openmpi version I build instead of the OS X suppleid version.


Doug Reeder
On May 23, 2010, at 10:45 AM, Glass, Micheal W wrote:

I’m having problems building a working version of openmpi 1.4.1/2 on  
a new Apple Mac Pro (dual quad-core nehalem processors) running snow  
leopard (10.6.3) with the Intel 11.1 compilers. I’ve tried the Intel  
11.1.084 and 11.1.088 versions of the compilers.  Everything appears  
to build just fine and some mpi test programs run but whenever I run  
a program with an MPI_Reduce() or MPI_Allreduce() I get a segfault  
(even with np=1).  I’m building openmpi with:


configure —without-xgrid —prefix= CC=icc CXX=icpc  
F77=ifort FC=ifort


When I build openmpi 1.4.1/2 with the GNU 4.3 compilers (installed  
via macports) using:


configure —without-xgrid —prefix= CC=gcc-mp-4.3  
CXX=g++-mp-4.3 F77=gfortran-mp-4.3 FC=gfortran-mp-4.3


all my mpi tests (6000+) run fine.  Any help would be appreciated.

Thanks,
Mike
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