[OMPI users] Open MPI 1.0.2 with XGrid on Netvolumes failed to run (wrong ownership)

2006-06-04 Thread Frank

I don't know wheter this is Open MPI or XGrid related:

   mpirun -d -np 1 ./vhone

with vhone installed on a local volume with XGrid environment set up 
run's successfully and the output-files belong to the user nobody (see 
attachment dirlist_xgrid_local.txt).


   mpirund -d -np 1 ./vhone

with vhone installed on a network-volume with XGrid environment set up 
failed to run successfully, 'cause each time an output file should be 
written to an error occured since the output-file belongs to the user 
who started the run (see attachment dirlist_xgrid_netvolume.txt).


Without XGrid set up vhone run's just fine on network-volumes, too (see 
attachment dirlist_noxgrid_netvolume.txt).


Yours,
Frank
total 117520
drwxrwxrwx   80 motte   wheel  2720 Jun  4 10:02 .
drwxrwxrwx7 admin   wheel   238 Jun  3 13:00 ..
-rw-rw-rw-1 motte   wheel 21508 Jun  3 13:01 .DS_Store
-rw-rw-rw-1 motte   wheel  2999 Jun  4 09:16 Makefile
-rw-rw-rw-1 motte   wheel  2969 Jun  3 12:58 Makefile.orig
-rw-rw-rw-1 motte   wheel  3007 Jun  3 13:00 Makefile~
-rw-r--r--1 nobody  wheel   5248423 Jun  4 09:25 Tsod3_1000.
-rw-r--r--1 nobody  wheel   5248423 Jun  4 09:28 Tsod3_1001.
-rw-r--r--1 nobody  wheel   5248423 Jun  4 09:30 Tsod3_1002.
-rw-r--r--1 nobody  wheel   5248423 Jun  4 09:35 Tsod3_1003.
-rw-r--r--1 nobody  wheel   5276612 Jun  4 09:25 Tsod3daa.000
-rw-r--r--1 nobody  wheel   5276612 Jun  4 09:28 Tsod3dab.000
-rw-r--r--1 nobody  wheel   5276612 Jun  4 09:30 Tsod3dac.000
-rw-r--r--1 nobody  wheel   5276612 Jun  4 09:35 Tsod3dad.000
-rw-r--r--1 nobody  wheel   890 Jun  4 09:35 Tsod3hst
-rw-r--r--1 nobody  wheel  17304731 Jun  4 09:35 Tsod3mvy
-rw-r--r--1 motte   wheel 0 Jun  4 10:02 dirlist.txt
-rw-rw-rw-1 motte   wheel  2273 Jun  3 12:58 dtcon.f
-rw-r--r--1 motte   wheel  4360 Jun  4 09:21 dtcon.o
-rw-rw-rw-1 motte   wheel   920 Jun  3 12:58 dump.f
-rw-r--r--1 motte   wheel  2500 Jun  4 09:21 dump.o
-rw-rw-rw-1 motte   wheel  3583 Jun  3 12:58 evolve.f
-rw-r--r--1 motte   wheel  4288 Jun  4 09:21 evolve.o
-rw-rw-rw-1 motte   wheel  1709 Jun  3 12:58 flatten.f
-rw-r--r--1 motte   wheel  1292 Jun  4 09:21 flatten.o
-rw-rw-rw-1 motte   wheel  2640 Jun  3 12:58 forces.f
-rw-r--r--1 motte   wheel  2440 Jun  4 09:21 forces.o
-rw-rw-rw-1 motte   wheel  1287 Jun  3 12:58 global.h
-rw-rw-rw-1 motte   wheel  2153 Jun  3 12:58 grid.f
-rw-r--r--1 motte   wheel  1232 Jun  4 09:21 grid.o
-rw-rw-rw-1 motte   wheel  1329 Jun  3 12:58 imagexy.f
-rw-r--r--1 motte   wheel  2800 Jun  4 09:21 imagexy.o
-rw-rw-rw-1 motte   wheel  1003 Jun  3 12:58 imagexz.f
-rw-r--r--1 motte   wheel  2080 Jun  4 09:21 imagexz.o
-rw-rw-rw-1 motte   wheel  1001 Jun  3 12:58 imageyz.f
-rw-r--r--1 motte   wheel  2080 Jun  4 09:21 imageyz.o
-rw-rw-rw-1 motte   wheel   179 Jun  3 13:11 indat
-rw-rw-rw-1 motte   wheel   179 Jun  3 12:58 indat~
-rw-rw-rw-1 motte   wheel  4664 Jun  3 13:11 init.f
-rw-r--r--1 motte   wheel  6136 Jun  4 09:21 init.o
-rw-rw-rw-1 motte   wheel  4664 Jun  3 12:58 init_Tsod3
-rw-rw-rw-1 motte   wheel  4566 Jun  3 12:58 init_bow
-rw-rw-rw-1 motte   wheel  4664 Jun  3 12:58 init_sod
-rw-rw-rw-1 motte   wheel  4770 Jun  3 12:58 init_swb
-rw-rw-rw-1 motte   wheel  3450 Jun  3 12:58 parabola.f
-rw-r--r--1 motte   wheel  1660 Jun  4 09:21 parabola.o
-rw-rw-rw-1 motte   wheel  2152 Jun  3 12:58 paraset.f
-rw-r--r--1 motte   wheel  1028 Jun  4 09:21 paraset.o
-rw-rw-rw-1 motte   wheel  3313 Jun  3 12:58 ppm.f
-rw-r--r--1 motte   wheel  3004 Jun  4 09:21 ppm.o
-rw-rw-rw-1 motte   wheel  2956 Jun  3 12:58 prin.f
-rw-r--r--1 motte   wheel  5632 Jun  4 09:21 prin.o
-rw-rw-rw-1 motte   wheel  5194 Jun  3 12:58 remap.f
-rw-r--r--1 motte   wheel  4520 Jun  4 09:21 remap.o
-rw-rw-rw-1 motte   wheel  3884 Jun  3 12:58 riemann.f
-rw-r--r--1 motte   wheel  1888 Jun  4 09:21 riemann.o
-rw-rw-rw-1 motte   wheel  1242 Jun  3 12:59 sweep.h
-rw-rw-rw-1 motte   wheel  4171 Jun  3 12:59 sweepbc.f
-rw-r--r--1 motte   wheel  8592 Jun  4 09:21 sweepbc.o
-rw-rw-rw-1 motte   wheel   200 Jun  3 12:59 sweepsize.h
-rw-rw-rw-1 motte   wheel  1617 Jun  3 12:59 sweepx.f
-rw-r--r--1 motte   wheel  2180 Jun  4 09:21 sweepx.o
-rw-rw-rw-1 motte   wheel  1769 Jun  3 12:59 sweepxi.f
-rw-r--r--1 motte   wheel  2244 Jun  4 09:21 sweepxi.o
-rw-rw-rw-1 motte   wheel  1848 Jun  3 12:59 sweepy.f
-rw-r--r--1 motte   wheel  2276 Jun  4 09:21 sweepy.o
-rw-rw-rw-1 motte   wheel  1718 Jun  3 12:59 sweepyi.f
-rw-r--r--1 motte   wheel  2212 Jun  4 09:21 sweepyi.o
-rw-rw-rw-1 motte   wh

[OMPI users] Open MPI 1.2a1r10185 and XGrid

2006-06-04 Thread Frank

Dear All,

[powerbook:Shared/local/MVH-1.0] motte% mpirun -d -np 1 ./vhone
[powerbook.2-net:00393] [0,0,0] setting up session dir with
[powerbook.2-net:00393] universe default-universe
[powerbook.2-net:00393] user motte
[powerbook.2-net:00393] host powerbook.2-net
[powerbook.2-net:00393] jobid 0
[powerbook.2-net:00393] procid 0
[powerbook.2-net:00393] procdir: 
/tmp/openmpi-sessions-motte@powerbook.2-net_0/default-universe/0/0
[powerbook.2-net:00393] jobdir: 
/tmp/openmpi-sessions-motte@powerbook.2-net_0/default-universe/0
[powerbook.2-net:00393] unidir: 
/tmp/openmpi-sessions-motte@powerbook.2-net_0/default-universe

[powerbook.2-net:00393] top: openmpi-sessions-motte@powerbook.2-net_0
[powerbook.2-net:00393] tmp: /tmp
[powerbook.2-net:00393] [0,0,0] contact_file 
/tmp/openmpi-sessions-motte@powerbook.2-net_0/default-universe/universe-setup.txt

[powerbook.2-net:00393] [0,0,0] wrote setup file
Signal:10 info.si_errno:0(Unknown error: 0) si_code:1(BUS_ADRALN)
Failing at addr:0x10
*** End of error message ***
Bus error
[powerbook:Shared/local/MVH-1.0] motte%


I've attached the config.log. The very same error occured with Open MPI 
1.1a3, too.


vhone runs fine, when not submitted to the XGrid, i.e. without 
XGRID_CONTROLLER_HOSTNAME and XGRID_CONTROLLER_PASSWORD set up.


Have you got any ideas to fix this?

Yours,
Frank
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.

It was created by Open MPI configure 1.2a1, which was
generated by GNU Autoconf 2.59.  Invocation command line was

  $ ./configure --prefix=/usr/local/openmpi/openmpi-1.2a1r10185

## - ##
## Platform. ##
## - ##

hostname = powerbook.2-net
uname -m = Power Macintosh
uname -r = 8.6.0
uname -s = Darwin
uname -v = Darwin Kernel Version 8.6.0: Tue Mar  7 16:58:48 PST 2006; 
root:xnu-792.6.70.obj~1/RELEASE_PPC

/usr/bin/uname -p = powerpc
/bin/uname -X = unknown

/bin/arch  = unknown
/usr/bin/arch -k   = unknown
/usr/convex/getsysinfo = unknown
hostinfo   = Mach kernel version:
 Darwin Kernel Version 8.6.0: Tue Mar  7 16:58:48 PST 2006; 
root:xnu-792.6.70.obj~1/RELEASE_PPC
Kernel configured for a single processor only.
1 processor is physically available.
Processor type: ppc7450 (PowerPC 7450)
Processor active: 0
Primary memory available: 1.50 gigabytes
Default processor set: 82 tasks, 243 threads, 1 processors
Load average: 2.60, Mach factor: 0.43
/bin/machine   = unknown
/usr/bin/oslevel   = unknown
/bin/universe  = unknown

PATH: /usr/local/gts/bin
PATH: /usr/local/openmpi/openmpi-1.1a3/bin
PATH: /usr/local/bin
PATH: /sw/share/Geomview/bin
PATH: /sw/bin
PATH: /sw/sbin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /Users/admin
PATH: /usr/X11R6/bin
PATH: /Users/admin/geant4.8/bin/Darwin-g++


## --- ##
## Core tests. ##
## --- ##

configure:1822: checking for a BSD-compatible install
configure:1877: result: /usr/bin/install -c
configure:1888: checking whether build environment is sane
configure:1931: result: yes
configure:1996: checking for gawk
configure:2012: found /sw/bin/gawk
configure:2022: result: gawk
configure:2032: checking whether make sets $(MAKE)
configure:2052: result: yes
configure:2341: checking Open MPI version
configure:2343: result: 1.2a1r10185
configure:2345: checking Open MPI Subversion repository version
configure:2347: result: r10185
configure:2443: checking Open Run-Time Environment version
configure:2445: result: 1.2a1r10185
configure:2447: checking Open Run-Time Environment Subversion repository version
configure:2449: result: r10185
configure:2545: checking Open Portable Access Layer version
configure:2547: result: 1.2a1r10185
configure:2549: checking Open Portable Access Layer Subversion repository 
version
configure:2551: result: r10185
configure:2619: builddir: /usr/local/openmpi/openmpi-1.2a1r10185
configure:2621: srcdir: /usr/local/openmpi/openmpi-1.2a1r10185
configure:2643: checking build system type
configure:2661: result: powerpc-apple-darwin8.6.0
configure:2689: checking host system type
configure:2703: result: powerpc-apple-darwin8.6.0
configure:2857: checking Whether to run code coverage
configure:2884: result: no
configure:2894: checking whether to debug memory usage
configure:2906: result: no
configure:2926: checking whether to profile memory usage
configure:2938: result: no
configure:2958: checking if want developer-level compiler pickyness
configure:2970: result: no
configure:2985: checking if want developer-level debugging code
configure:2997: result: no
configure:3027: checking if want Fortran 77 bindings
configure:3035: result: yes
configure:3049: checking if want Fortran 90 bindings
configure:3057: result: yes
configure:3066: checking desired Fortran 90 bindings "size"
configure:3148: result: small
configure:3155: checking whether to enable PMPI
configure:3163: result: yes
config