[Freesurfer] basic questions about cortical thickness
Hi, I have some basic questions about cortical thickness. 1) What's the image requirement for calculating cortical thickness? slice thickness, resolution? 2) If analyzing one brain image on basic system requirement linux machine ( 2G ram, 2G processor ). How long does it take? Thanks Chunchun ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
[Freesurfer] Flag: -subjectid unrecognized
hi, I converted one analyze file to MGZ format, then try use the recon-all -autorecon-all -subjid bert (replace subjectid by myid ), but the command run nothing but Flag: -subjectid unrecognized. Anybody has some idea how to fix it? Thanks for any help! Chunchun ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
[Freesurfer] Testing FreeSurfer installation error
I installed the freesurfer following exactly as the instructions on the website. When I test it, "recon-all -s bert -all" doesn't work, it runs for a few min. and shows "flirt: Command not found. ERROR: running flirt". When I try to use my own data, convert dicom to mgt, "mri_convert" command shows "can't find dicom". What's the problem with the installation? Any help? Thanks Chunchun ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
[Freesurfer] Recommendation for Linux machine
Hi, We plan to buy Linux machine for freesurfer and other brain image processing. Any recommendation and related links? Thanks Chunchun ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
