[O] org-mac-protocol no remember window and Error message "Symbol's function definition is void: caddr" from emacs server
I have Mac OSX 10.6.8
Emacs 23.3.1 (i686-apple-darwin10.0.0, NS apple-appkit-1038.36) complied from
source as /Applications/Emacs.app
Org-mode version 7.7
The latest clone of the git repository for org-mac-protocol
(boundp 'server-process) returns t confirming the emacs server is running
when i run org-remember on Skim there is no Remember buffer created, or entry
in inbox.org
I get this script output (i.e. the Applescript works):
/Applications/Emacs.app/Contents/MacOS/bin/emacsclient
org-protocol:/mac-remember:/y/skim%3A%2FUsers%2Fdavid%2FDocuments%2Fmedlit%2FStart-D%20Large-Scale%2C%20Practical%2C%20Clinical%20Trial%20for%20Patients%20With%20Depression.pdf%3A%3A3/Start-D%20Large-Scale%2C%20Practical%2C%20Clinical%20Trial%20for%20Patients%20With%20Depression.pdf%3ASkim/Start-D%20Large-Scale%2C%20Practical%2C%20Clinical%20Trial%20for%20Patients%20With%20Depression.pdf/Intervention%0AA%20systematic%20approach%20to%20treatment%20called%20measurement-based%20care:Skim
Here is the relevant part of my .emacs (from line 0)
(require 'recentf)
(recentf-mode 1)
(require 'remember)
(setq org-directory "~/org/")
(setq org-default-notes-file "~/org/inbox.org")
(require 'org-mac-protocol)
(server-start)
(setq org-remember-templates
'(("AppleScript remember" ?y "* %:shortdesc\n %:initial\n Source: %u,
%c\n\n %?" (concat org-directory "inbox.org") "Remember")
("AppleScript note" ?z "* %?\n\n Date: %u\n" (concat org-directory
"inbox.org") "Notes")))
(require 'org)
when I run this in a terminal I get this:
Waiting for Emacs...
*ERROR*: Symbol's function definition is void: caddr
Can anyone spot the cause of the problem please?
David
[O] org-mac-protocol no remember window and Symbol's function definition is void: caddr from emacs server
I have Mac OSX 10.6.8
Emacs 23.3.1 (i686-apple-darwin10.0.0, NS apple-appkit-1038.36) complied from
source as /Applications/Emacs.app
Org-mode version 7.7
The latest clone of the git repository for org-mac-protocol
(boundp 'server-process) returns t confirming the emacs server is running
when i run org-remember on Skim there is no Remember buffer created, or entry
in inbox.org
I get this script output (i.e. the Applescript works):
/Applications/Emacs.app/Contents/MacOS/bin/emacsclient
org-protocol:/mac-remember:/y/skim%3A%2FUsers%2Fdavid%2FDocuments%2Fmedlit%2FStart-D%20Large-Scale%2C%20Practical%2C%20Clinical%20Trial%20for%20Patients%20With%20Depression.pdf%3A%3A3/Start-D%20Large-Scale%2C%20Practical%2C%20Clinical%20Trial%20for%20Patients%20With%20Depression.pdf%3ASkim/Start-D%20Large-Scale%2C%20Practical%2C%20Clinical%20Trial%20for%20Patients%20With%20Depression.pdf/Intervention%0AA%20systematic%20approach%20to%20treatment%20called%20measurement-based%20care:Skim
Here is the relevant part of my .emacs (from line 0)
(require 'recentf)
(recentf-mode 1)
(require 'remember)
(setq org-directory "~/org/")
(setq org-default-notes-file "~/org/inbox.org")
(require 'org-mac-protocol)
(server-start)
(setq org-remember-templates
'(("AppleScript remember" ?y "* %:shortdesc\n %:initial\n Source: %u,
%c\n\n %?" (concat org-directory "inbox.org") "Remember")
("AppleScript note" ?z "* %?\n\n Date: %u\n" (concat org-directory
"inbox.org") "Notes")))
(require 'org)
when I run this in a terminal I get this:
Waiting for Emacs...
*ERROR*: Symbol's function definition is void: caddr
Can anyone spot the cause of the problem please?
David
[O] citations not incoprporated from bib file when exporting from .org to pdflatex
I am exporting a file stroke.org <http://stroke.org/> using the bibliography
file stroke.bib in the same directory
The citations are not being incorporated into the pdf file and there is no
reference to the .bib file in the intermediate stroke.tex output
An example from stroke.log: LaTeX Warning: Citation `Drummond:2014aa' on page 2
undefined on input line 71.
The header for stroke.org <http://stroke.org/> is:
#+LATEX_CLASS: article
#+BIBLIOGRAPHY: stroke vancouver option:-d
My emacs is from MacPorts GNU Emacs 24.5.1 (x86_64-apple-darwin15.4.0, NS
apple-appkit-1404.46)
of 2016-05-01 on teneleven-slave.macports.org
<http://teneleven-slave.macports.org/>
My .emacs file contains
(setq org-latex-pdf-process '("latexmk -pdflatex='pdflatex -interaction
nonstopmode' -pdf -bibtex -f %f"))
Org-mode version 8.3.4 (8.3.4-93-g0d72c3-elpaplus (I updated it as suggested
here http://orgmode.org/elpa.html <http://orgmode.org/elpa.html> but it made no
difference)
I’m using TexLive 2016 with fully up to date packages
Here is the preamble from stroke.tex (no mention of the .bib file)
% Created 2016-06-27 Mon 22:50
\documentclass[12pt]{article}
\usepackage[utf8]{inputenc}
..
\usepackage{wrapfig}
\author{David Abernethy}
\date{\today}
\title{}
\hypersetup{
pdfauthor={David Abernethy},
pdfcreator={Emacs 24.5.1 (Org mode 8.3.4)},..}
\begin{document}
My set up (Latex header in the .org file and .bib file with the .emacs entry)
used to work for this file but I have probably updated emacs and org via
macports since.
Can anyone see what is wrong? help much appreciated
David
[O] citations not incoprporated from bib file when exporting from .org to pdflatex
I am exporting a file stroke.org using the bibliography file stroke.bib in the
same directory
The citations are not being incorporated into the pdf file
An example from stroke.log: LaTeX Warning: Citation `Drummond:2014aa' on page 2
undefined on input line 71.
The header for stroke.org is:
#+LATEX_CLASS: article
#+BIBLIOGRAPHY: stroke vancouver option:-d
My emacs is from MacPorts GNU Emacs 24.5.1 (x86_64-apple-darwin15.4.0, NS
apple-appkit-1404.46)
of 2016-05-01 on teneleven-slave.macports.org
My .emacs file contains
(setq org-latex-pdf-process '("latexmk -pdflatex='pdflatex -interaction
nonstopmode' -pdf -bibtex -f %f"))
Org-mode version 8.3.4 (8.3.4-93-g0d72c3-elpaplus (I updated it as suggested
here http://orgmode.org/elpa.html <http://orgmode.org/elpa.html> but it made no
difference)
I’m using TexLive 2016 with fully up to date packages
Here is the preamble from stroke.tex (no mention of the .bib file)
% Created 2016-06-27 Mon 22:50
\documentclass[12pt]{article}
\usepackage[utf8]{inputenc}
..
\usepackage{wrapfig}
\author{David Abernethy}
\date{\today}
\title{}
\hypersetup{
pdfauthor={David Abernethy},
pdfcreator={Emacs 24.5.1 (Org mode 8.3.4)},..}
\begin{document}
My set up (Latex header in the .org file and .bib file with the .emacs entry)
used to work for this file but I have probably updated emacs since.
Can anyone see what is wrong? help much appreciated
David
[O] citations not incoprporated from bib file when exporting from .org to pdflatex
I am exporting a file stroke.org <http://stroke.org/> using the bibliography
file stroke.bib in the same directory
The citations are not being incorporated into the pdf file
An example from stroke.log: LaTeX Warning: Citation `Drummond:2014aa' on page 2
undefined on input line 71.
The header for stroke.org <http://stroke.org/> is:
#+LATEX_CLASS: article
#+BIBLIOGRAPHY: stroke vancouver option:-d
My emacs is from MacPorts GNU Emacs 24.5.1 (x86_64-apple-darwin15.4.0, NS
apple-appkit-1404.46)
of 2016-05-01 on teneleven-slave.macports.org
<http://teneleven-slave.macports.org/>
My .emacs file contains
(setq org-latex-pdf-process '("latexmk -pdflatex='pdflatex -interaction
nonstopmode' -pdf -bibtex -f %f"))
Org-mode version 8.3.4 (8.3.4-93-g0d72c3-elpaplus (I updated it as suggested
here http://orgmode.org/elpa.html <http://orgmode.org/elpa.html> but it made no
difference)
I’m using TexLive 2016 with fully up to date packages
Here is the preamble from stroke.tex (no mention of the .bib file)
% Created 2016-06-27 Mon 22:50
\documentclass[12pt]{article}
\usepackage[utf8]{inputenc}
..
\usepackage{wrapfig}
\author{David Abernethy}
\date{\today}
\title{}
\hypersetup{
pdfauthor={David Abernethy},
pdfcreator={Emacs 24.5.1 (Org mode 8.3.4)},..}
\begin{document}
My set up (Latex header in the .org file and .bib file with the .emacs entry)
used to work for this file but I have probably updated emacs since.
Can anyone see what is wrong? help much appreciated
David
Re: [O] citations not incoprporated from bib file when exporting from .org to pdflatex
I eventually stumbled on the solution to my problem:
I restructured my document removing the #+BIBLIOGRAPHY: bib-file style
statement which no longer seems to work, placing the LateX commands to specify
the bibliography at the end of the file:
#+LATEX_CLASS: article
#+LATEX_HEADER: \usepackage[margin=0.5in]{geometry}
#+LaTeX_CLASS_OPTIONS: [12pt]
* Objectives
* Stroke care guidelines
#+LATEX: \bibliographystyle{vancouver}
#+LATEX: \bibliography{stroke}
I have this in .emacs to ensure the triple compilation required:
(setq org-latex-pdf-process '("latexmk -pdflatex='pdflatex -interaction
nonstopmode' -pdf -bibtex -f %f”))
I have not been able to find any guidance on how to deal with this change in
behaviour by org-mode so post this for others to save them the many hours I
wasted when I have a deadline to meet
> On 27/06/2016, at 23:20, David Abernethy wrote:
>
>
> I am exporting a file stroke.org <http://stroke.org/> using the bibliography
> file stroke.bib in the same directory
> The citations are not being incorporated into the pdf file
>
> An example from stroke.log: LaTeX Warning: Citation `Drummond:2014aa' on page
> 2 undefined on input line 71.
>
> The header for stroke.org <http://stroke.org/> is:
> #+LATEX_CLASS: article
> #+BIBLIOGRAPHY: stroke vancouver option:-d
>
[O] Tex Live Utility Update list failed on MacTex 2014 on Yosemite even after updating to latest TLU version 1.19 (solved TLU after reading the Log file - absent subdirectory /usr/local/texlive/2014/t
After updating to Yosemite over Mavericks I tried to update MacTex 2014. I updated Tex Live Utility to the latest version 1.19 as recommended elsewhere on this list, but found that the list of available packages for update failed to populate. I think this is a problem with MacTex 2014, specifically the (lack of some) default subdirectories in /usr/local/texlive/2014/tlpkg/, in particular the subdirectory needs to be created. I eventually discovered this from the informative log file. There were two problems: > Failed executing `/usr/texbin/tlmgr --machine-readable --repository > http://mirror.as24220.net/pub/ctan/systems/texlive/tlnet/ update --list > --all` (error 1) tlmgr: package repository > http://mirror.as24220.net/pub/ctan/systems/texlive/tlnet/ > === > tlmgr itself needs to be updated. > Please do this via either > tlmgr update --self > .. This command would not work until I created /usr/local/texlive/2014/tlpkg/backups > Then continue with other updates as usual. > === > tlmgr: backupdir as set in tlpdb /usr/local/texlive/2014/tlpkg/backups is > not a directory. Exiting. Then Tex Live Utility worked fine
