Re: Failing to compile runPiperGui profile in Intellij [EXTERNAL]
This appears to be a bug in intellij, and oddly enough it just started showing up in my system today. You can go through the possible solutions here (I haven't tried): https://stackoverflow.com/questions/20496239/maven-plugins-can-not-be-found-in-intellij There are probably other solutions out there. If you find one please share. Sean From: Reed Villanueva Sent: Thursday, March 29, 2018 4:08 PM To: dev@ctakes.apache.org Subject: Failing to compile runPiperGui profile in Intellij [EXTERNAL] Using the instructions of the dev guide ( https://urldefense.proofpoint.com/v2/url?u=https-3A__cwiki.apache.org_confluence_display_CTAKES_cTAKES-2B4.0-2BDeveloper-2BInstall-2BGuide-23cTAKES4.0DeveloperInstallGuide-2DRunningUIMACVDwithMaven&d=DwIFaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=xSzM-Gf8hgP4XQgXM74hPSwUsXhvzcKWWkVfDnaid5Y&s=7uzLWQ_UTWoiVqMKOzfom8yVgwXpBoHOeKpqzzlrWok&e=) to try to compile the runPiperGui profile in Intellij IDE, I get the following error: [INFO] ctakes-examples FAILURE [ > 9.248 s] > [INFO] Apache cTAKES Resources ctakes-ytex-res SKIPPED > [INFO] Apache cTAKES YTEX . SKIPPED > [INFO] Apache cTAKES YTEX UIMA SKIPPED > [INFO] Apache cTAKES YTEX Web . SKIPPED > [INFO] Apache cTAKES Distribution . SKIPPED > [INFO] Apache cTAKES Regression-test .. SKIPPED > [INFO] Apache cTAKES template filler .. SKIPPED > [INFO] > > [INFO] BUILD FAILURE > [INFO] > > [INFO] Total time: 20.514 s > [INFO] Finished at: 2018-03-29T09:38:11-10:00 > [INFO] Final Memory: 72M/1300M > [INFO] > > [ERROR] Failed to execute goal > org.codehaus.mojo:exec-maven-plugin:1.2.1:java (default) on project > ctakes-examples: Unable to parse configuration of mojo > org.codehaus.mojo:exec-maven-plugin:1.2.1:java for parameter arguments: > Cannot store value into array: ArrayStoreException -> [Help 1] Don't work with java often, but googling the error, looking at this stack overflow post ( https://urldefense.proofpoint.com/v2/url?u=https-3A__stackoverflow.com_questions_23832192_mvn-2Dexecexec-2Dand-2Dmvn-2Dexecjava-2Ddifference&d=DwIFaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=xSzM-Gf8hgP4XQgXM74hPSwUsXhvzcKWWkVfDnaid5Y&s=lKgucjFz23lmBLcQEyhJpt_kX_bc4cZm3kVaQj3R5-I&e=), and taking a shot in the dark, I changed the trunk/ctakes-examples/pom.xml's execution goal for the org.codehaus.mojo.exec-maven-plugin plugin from > > org.codehaus.mojo > exec-maven-plugin > > > > java > > > > > > to > > > org.codehaus.mojo > exec-maven-plugin > > > > exec > > > > > > I now seem to be able to compile the piper submitter GUI (though the error does show up after I close the GUI). Could someone let me know what is happening here? Is this normal? Thanks.
Re: Failing to compile runPiperGui profile in Intellij [EXTERNAL]
By the way, if you use the exec goal you can do things like pass more memory or
start with the default clinical pipeline, etc. Sean
clinicalGui
clinicalGui
org.codehaus.mojo
exec-maven-plugin
1.2.1
compile
exec
java
true
true
${project.parent.basedir}
-classpath
-Xmx4G
org.apache.ctakes.gui.pipeline.PiperRunnerGui
-p
resources/org/apache/ctakes/clinical/pipeline/DefaultFastPipeline.piper
From: Reed Villanueva
Sent: Thursday, March 29, 2018 4:08 PM
To: dev@ctakes.apache.org
Subject: Failing to compile runPiperGui profile in Intellij [EXTERNAL]
Using the instructions of the dev guide (
https://urldefense.proofpoint.com/v2/url?u=https-3A__cwiki.apache.org_confluence_display_CTAKES_cTAKES-2B4.0-2BDeveloper-2BInstall-2BGuide-23cTAKES4.0DeveloperInstallGuide-2DRunningUIMACVDwithMaven&d=DwIFaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=xSzM-Gf8hgP4XQgXM74hPSwUsXhvzcKWWkVfDnaid5Y&s=7uzLWQ_UTWoiVqMKOzfom8yVgwXpBoHOeKpqzzlrWok&e=)
to try to compile the runPiperGui profile in Intellij IDE, I get the
following error:
[INFO] ctakes-examples FAILURE [
> 9.248 s]
> [INFO] Apache cTAKES Resources ctakes-ytex-res SKIPPED
> [INFO] Apache cTAKES YTEX . SKIPPED
> [INFO] Apache cTAKES YTEX UIMA SKIPPED
> [INFO] Apache cTAKES YTEX Web . SKIPPED
> [INFO] Apache cTAKES Distribution . SKIPPED
> [INFO] Apache cTAKES Regression-test .. SKIPPED
> [INFO] Apache cTAKES template filler .. SKIPPED
> [INFO]
>
> [INFO] BUILD FAILURE
> [INFO]
>
> [INFO] Total time: 20.514 s
> [INFO] Finished at: 2018-03-29T09:38:11-10:00
> [INFO] Final Memory: 72M/1300M
> [INFO]
>
> [ERROR] Failed to execute goal
> org.codehaus.mojo:exec-maven-plugin:1.2.1:java (default) on project
> ctakes-examples: Unable to parse configuration of mojo
> org.codehaus.mojo:exec-maven-plugin:1.2.1:java for parameter arguments:
> Cannot store value into array: ArrayStoreException -> [Help 1]
Don't work with java often, but googling the error, looking at this stack
overflow post (
https://urldefense.proofpoint.com/v2/url?u=https-3A__stackoverflow.com_questions_23832192_mvn-2Dexecexec-2Dand-2Dmvn-2Dexecjava-2Ddifference&d=DwIFaQ&c=qS4goWBT7poplM69zy_3xhKwEW14JZMSdioCoppxeFU&r=fs67GvlGZstTpyIisCYNYmQCP6r0bcpKGd4f7d4gTao&m=xSzM-Gf8hgP4XQgXM74hPSwUsXhvzcKWWkVfDnaid5Y&s=lKgucjFz23lmBLcQEyhJpt_kX_bc4cZm3kVaQj3R5-I&e=),
and taking a shot in the dark, I changed the
trunk/ctakes-examples/pom.xml's execution goal for the
org.codehaus.mojo.exec-maven-plugin plugin from
>
> org.codehaus.mojo
> exec-maven-plugin
>
>
>
> java
>
>
>
>
>
> to
>
>
> org.codehaus.mojo
> exec-maven-plugin
>
>
>
> exec
>
>
>
>
>
> I now seem to be able to compile the piper submitter GUI (though the error
does show up after I close the GUI).
Could someone let me know what is happening here? Is this normal?
Thanks.
